Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC1P51610 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.69■■□□□ 1.06
HCFC1P51610 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.68■■□□□ 1.06
HCFC1P51610 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.68■■□□□ 1.06
HCFC1P51610 AC131212.1-201ENST00000613771 668 ntBASIC21.68■■□□□ 1.06
HCFC1P51610 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC1P51610 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC1P51610 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC1P51610 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.67■■□□□ 1.06
HCFC1P51610 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC1P51610 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC1P51610 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC1P51610 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCFC1P51610 BHLHE23-202ENST00000612929 1109 ntBASIC21.67■■□□□ 1.06
HCFC1P51610 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HCFC1P51610 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.66■■□□□ 1.06
HCFC1P51610 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.66■■□□□ 1.06
HCFC1P51610 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.65■■□□□ 1.06
HCFC1P51610 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.65■■□□□ 1.06
HCFC1P51610 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HCFC1P51610 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.64■■□□□ 1.06
HCFC1P51610 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
HCFC1P51610 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.64■■□□□ 1.05
HCFC1P51610 GUSBP5-201ENST00000418136 578 ntBASIC21.64■■□□□ 1.05
HCFC1P51610 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.64■■□□□ 1.05
HCFC1P51610 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.64■■□□□ 1.05
HCFC1P51610 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HCFC1P51610 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HCFC1P51610 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
HCFC1P51610 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.62■■□□□ 1.05
HCFC1P51610 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC1P51610 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.62■■□□□ 1.05
HCFC1P51610 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC1P51610 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.62■■□□□ 1.05
HCFC1P51610 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC1P51610 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HCFC1P51610 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HCFC1P51610 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HCFC1P51610 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HCFC1P51610 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HCFC1P51610 AC103834.1-201ENST00000520383 144 ntBASIC21.61■■□□□ 1.05
HCFC1P51610 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.61■■□□□ 1.05
HCFC1P51610 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HCFC1P51610 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HCFC1P51610 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HCFC1P51610 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.6■■□□□ 1.05
HCFC1P51610 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.6■■□□□ 1.05
HCFC1P51610 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HCFC1P51610 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HCFC1P51610 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HCFC1P51610 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
HCFC1P51610 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.6■■□□□ 1.05
HCFC1P51610 AL359504.2-201ENST00000605506 1601 ntBASIC21.59■■□□□ 1.05
HCFC1P51610 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.59■■□□□ 1.05
HCFC1P51610 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HCFC1P51610 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HCFC1P51610 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
HCFC1P51610 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
HCFC1P51610 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HCFC1P51610 AL139393.2-201ENST00000608721 2025 ntBASIC21.57■■□□□ 1.04
HCFC1P51610 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1P51610 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.57■■□□□ 1.04
HCFC1P51610 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1P51610 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.57■■□□□ 1.04
HCFC1P51610 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.57■■□□□ 1.04
HCFC1P51610 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1P51610 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
HCFC1P51610 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.57■■□□□ 1.04
HCFC1P51610 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HCFC1P51610 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1P51610 YBX1P4-201ENST00000392794 808 ntBASIC21.56■■□□□ 1.04
HCFC1P51610 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.56■■□□□ 1.04
HCFC1P51610 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.56■■□□□ 1.04
HCFC1P51610 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1P51610 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HCFC1P51610 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1P51610 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HCFC1P51610 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
HCFC1P51610 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HCFC1P51610 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1P51610 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1P51610 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1P51610 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1P51610 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1P51610 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1P51610 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
HCFC1P51610 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HCFC1P51610 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
HCFC1P51610 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.54■■□□□ 1.04
HCFC1P51610 WHAMMP3-201ENST00000611636 1609 ntBASIC21.54■■□□□ 1.04
HCFC1P51610 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
HCFC1P51610 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC1P51610 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HCFC1P51610 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC1P51610 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC1P51610 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC1P51610 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.53■■□□□ 1.04
HCFC1P51610 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HCFC1P51610 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HCFC1P51610 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms