Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.39■□□□□ 0.21
CXCL5P42830 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCL5P42830 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCL5P42830 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CXCL5P42830 AC093323.1-202ENST00000635031 2045 ntBASIC16.38■□□□□ 0.21
CXCL5P42830 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCL5P42830 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CXCL5P42830 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCL5P42830 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.37■□□□□ 0.21
CXCL5P42830 MIR3665-201ENST00000578708 105 ntBASIC16.37■□□□□ 0.21
CXCL5P42830 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCL5P42830 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.36■□□□□ 0.21
CXCL5P42830 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 WHAMMP3-201ENST00000611636 1609 ntBASIC16.36■□□□□ 0.21
CXCL5P42830 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.36■□□□□ 0.21
CXCL5P42830 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.36■□□□□ 0.21
CXCL5P42830 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CXCL5P42830 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCL5P42830 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CXCL5P42830 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCL5P42830 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCL5P42830 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCL5P42830 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL5P42830 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL5P42830 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.34■□□□□ 0.21
CXCL5P42830 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCL5P42830 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL5P42830 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL5P42830 AC110285.7-201ENST00000624417 1536 ntBASIC16.34■□□□□ 0.21
CXCL5P42830 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCL5P42830 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL5P42830 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CXCL5P42830 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL5P42830 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CXCL5P42830 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCL5P42830 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL5P42830 LINC00543-201ENST00000567234 1845 ntBASIC16.33■□□□□ 0.2
CXCL5P42830 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CXCL5P42830 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL5P42830 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL5P42830 DUX4L28-201ENST00000623687 678 ntBASIC16.32■□□□□ 0.2
CXCL5P42830 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL5P42830 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL5P42830 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL5P42830 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL5P42830 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL5P42830 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCL5P42830 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CXCL5P42830 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCL5P42830 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CXCL5P42830 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CXCL5P42830 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCL5P42830 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CXCL5P42830 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 AP006261.1-201ENST00000584783 668 ntBASIC16.3■□□□□ 0.2
CXCL5P42830 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.3■□□□□ 0.2
CXCL5P42830 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.3■□□□□ 0.2
CXCL5P42830 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL5P42830 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.29■□□□□ 0.2
CXCL5P42830 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CXCL5P42830 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.29■□□□□ 0.2
CXCL5P42830 PEX7-203ENST00000541292 945 ntTSL 5 BASIC16.29■□□□□ 0.2
CXCL5P42830 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCL5P42830 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms