Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.9■□□□□ 0.94
TNFSF4P23510 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF4P23510 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TNFSF4P23510 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.89■□□□□ 0.93
TNFSF4P23510 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.89■□□□□ 0.93
TNFSF4P23510 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF4P23510 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF4P23510 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF4P23510 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF4P23510 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF4P23510 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF4P23510 AL359504.2-201ENST00000605506 1601 ntBASIC20.88■□□□□ 0.93
TNFSF4P23510 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TNFSF4P23510 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF4P23510 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.87■□□□□ 0.93
TNFSF4P23510 MIR3960-201ENST00000583311 91 ntBASIC20.87■□□□□ 0.93
TNFSF4P23510 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF4P23510 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF4P23510 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF4P23510 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.87■□□□□ 0.93
TNFSF4P23510 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF4P23510 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF4P23510 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF4P23510 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFSF4P23510 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TNFSF4P23510 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF4P23510 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF4P23510 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF4P23510 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.85■□□□□ 0.93
TNFSF4P23510 AC025884.2-201ENST00000553429 711 ntBASIC20.85■□□□□ 0.93
TNFSF4P23510 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.85■□□□□ 0.93
TNFSF4P23510 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.85■□□□□ 0.93
TNFSF4P23510 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF4P23510 AC142472.1-201ENST00000612013 1741 ntBASIC20.84■□□□□ 0.93
TNFSF4P23510 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF4P23510 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF4P23510 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TNFSF4P23510 AC007029.1-201ENST00000604183 313 ntBASIC20.84■□□□□ 0.93
TNFSF4P23510 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF4P23510 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF4P23510 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF4P23510 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TNFSF4P23510 AP004609.3-201ENST00000610705 1884 ntBASIC20.84■□□□□ 0.93
TNFSF4P23510 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFSF4P23510 ABHD17AP5-201ENST00000580133 923 ntBASIC20.83■□□□□ 0.93
TNFSF4P23510 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TNFSF4P23510 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFSF4P23510 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF4P23510 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TNFSF4P23510 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFSF4P23510 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TNFSF4P23510 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TNFSF4P23510 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.82■□□□□ 0.92
TNFSF4P23510 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TNFSF4P23510 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF4P23510 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TNFSF4P23510 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TNFSF4P23510 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFSF4P23510 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF4P23510 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF4P23510 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.8■□□□□ 0.92
TNFSF4P23510 RP9P-202ENST00000450133 1212 ntBASIC20.8■□□□□ 0.92
TNFSF4P23510 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.8■□□□□ 0.92
TNFSF4P23510 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TNFSF4P23510 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFSF4P23510 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.8■□□□□ 0.92
TNFSF4P23510 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF4P23510 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF4P23510 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF4P23510 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF4P23510 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFSF4P23510 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
TNFSF4P23510 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TNFSF4P23510 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFSF4P23510 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.78■□□□□ 0.92
TNFSF4P23510 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFSF4P23510 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.77■□□□□ 0.92
TNFSF4P23510 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.77■□□□□ 0.92
TNFSF4P23510 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TNFSF4P23510 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.77■□□□□ 0.91
TNFSF4P23510 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.77■□□□□ 0.91
TNFSF4P23510 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.77■□□□□ 0.91
TNFSF4P23510 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFSF4P23510 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF4P23510 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFSF4P23510 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.76■□□□□ 0.91
TNFSF4P23510 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFSF4P23510 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF4P23510 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.75■□□□□ 0.91
TNFSF4P23510 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF4P23510 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFSF4P23510 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
TNFSF4P23510 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFSF4P23510 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFSF4P23510 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF4P23510 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
TNFSF4P23510 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFSF4P23510 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFSF4P23510 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFSF4P23510 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms