Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSDP07339 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSDP07339 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSDP07339 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.3■□□□□ 0.84
CTSDP07339 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSDP07339 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CTSDP07339 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.3■□□□□ 0.84
CTSDP07339 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.29■□□□□ 0.84
CTSDP07339 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.29■□□□□ 0.84
CTSDP07339 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSDP07339 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CTSDP07339 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSDP07339 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.28■□□□□ 0.84
CTSDP07339 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSDP07339 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CTSDP07339 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSDP07339 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSDP07339 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CTSDP07339 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.26■□□□□ 0.83
CTSDP07339 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.26■□□□□ 0.83
CTSDP07339 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSDP07339 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSDP07339 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSDP07339 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.26■□□□□ 0.83
CTSDP07339 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.26■□□□□ 0.83
CTSDP07339 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSDP07339 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CTSDP07339 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.26■□□□□ 0.83
CTSDP07339 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSDP07339 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CTSDP07339 AC110285.7-201ENST00000624417 1536 ntBASIC20.25■□□□□ 0.83
CTSDP07339 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTSDP07339 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.25■□□□□ 0.83
CTSDP07339 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSDP07339 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSDP07339 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSDP07339 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.24■□□□□ 0.83
CTSDP07339 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSDP07339 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSDP07339 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSDP07339 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.24■□□□□ 0.83
CTSDP07339 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CTSDP07339 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSDP07339 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.23■□□□□ 0.83
CTSDP07339 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSDP07339 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.23■□□□□ 0.83
CTSDP07339 SUZ12P1-203ENST00000578195 985 ntBASIC20.23■□□□□ 0.83
CTSDP07339 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSDP07339 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSDP07339 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSDP07339 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTSDP07339 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTSDP07339 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTSDP07339 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTSDP07339 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.21■□□□□ 0.83
CTSDP07339 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSDP07339 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSDP07339 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTSDP07339 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.21■□□□□ 0.83
CTSDP07339 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.21■□□□□ 0.83
CTSDP07339 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSDP07339 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTSDP07339 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTSDP07339 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSDP07339 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTSDP07339 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTSDP07339 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSDP07339 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSDP07339 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSDP07339 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.2■□□□□ 0.82
CTSDP07339 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSDP07339 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTSDP07339 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTSDP07339 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.19■□□□□ 0.82
CTSDP07339 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSDP07339 AL139125.2-201ENST00000623134 1869 ntBASIC20.19■□□□□ 0.82
CTSDP07339 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSDP07339 AC022211.4-201ENST00000625094 2161 ntBASIC20.19■□□□□ 0.82
CTSDP07339 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTSDP07339 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.19■□□□□ 0.82
CTSDP07339 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
CTSDP07339 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSDP07339 AC138932.3-201ENST00000567634 1902 ntBASIC20.18■□□□□ 0.82
CTSDP07339 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSDP07339 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSDP07339 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.17■□□□□ 0.82
CTSDP07339 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.17■□□□□ 0.82
CTSDP07339 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSDP07339 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSDP07339 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSDP07339 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSDP07339 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSDP07339 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTSDP07339 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSDP07339 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSDP07339 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSDP07339 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.15■□□□□ 0.82
CTSDP07339 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.15■□□□□ 0.82
CTSDP07339 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTSDP07339 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms