Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.44■■□□□ 1.82
RB1P06400 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RB1P06400 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RB1P06400 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.43■■□□□ 1.82
RB1P06400 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
RB1P06400 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RB1P06400 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.42■■□□□ 1.82
RB1P06400 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
RB1P06400 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RB1P06400 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.42■■□□□ 1.82
RB1P06400 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.42■■□□□ 1.82
RB1P06400 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
RB1P06400 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
RB1P06400 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
RB1P06400 AL359504.2-201ENST00000605506 1601 ntBASIC26.4■■□□□ 1.82
RB1P06400 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RB1P06400 AL356441.2-201ENST00000443009 864 ntBASIC26.4■■□□□ 1.82
RB1P06400 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RB1P06400 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
RB1P06400 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RB1P06400 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.4■■□□□ 1.82
RB1P06400 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.4■■□□□ 1.82
RB1P06400 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RB1P06400 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RB1P06400 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RB1P06400 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
RB1P06400 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
RB1P06400 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RB1P06400 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.38■■□□□ 1.81
RB1P06400 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.38■■□□□ 1.81
RB1P06400 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RB1P06400 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RB1P06400 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RB1P06400 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RB1P06400 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
RB1P06400 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RB1P06400 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RB1P06400 ABCB10P3-201ENST00000561950 2166 ntBASIC26.35■■□□□ 1.81
RB1P06400 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.35■■□□□ 1.81
RB1P06400 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RB1P06400 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.34■■□□□ 1.81
RB1P06400 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.34■■□□□ 1.81
RB1P06400 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RB1P06400 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RB1P06400 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.33■■□□□ 1.81
RB1P06400 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.33■■□□□ 1.81
RB1P06400 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
RB1P06400 AC087393.1-201ENST00000582896 145 ntBASIC26.33■■□□□ 1.81
RB1P06400 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
RB1P06400 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RB1P06400 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RB1P06400 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.32■■□□□ 1.8
RB1P06400 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RB1P06400 Z92544.1-202ENST00000571933 1220 ntBASIC26.32■■□□□ 1.8
RB1P06400 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.32■■□□□ 1.8
RB1P06400 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RB1P06400 AL139393.2-201ENST00000608721 2025 ntBASIC26.31■■□□□ 1.8
RB1P06400 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.31■■□□□ 1.8
RB1P06400 AC239859.2-201ENST00000444165 318 ntBASIC26.31■■□□□ 1.8
RB1P06400 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
RB1P06400 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RB1P06400 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.31■■□□□ 1.8
RB1P06400 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RB1P06400 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RB1P06400 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.3■■□□□ 1.8
RB1P06400 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.3■■□□□ 1.8
RB1P06400 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RB1P06400 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RB1P06400 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
RB1P06400 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RB1P06400 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RB1P06400 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.29■■□□□ 1.8
RB1P06400 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.29■■□□□ 1.8
RB1P06400 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
RB1P06400 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RB1P06400 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.28■■□□□ 1.8
RB1P06400 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RB1P06400 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RB1P06400 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.27■■□□□ 1.8
RB1P06400 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RB1P06400 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
RB1P06400 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RB1P06400 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.26■■□□□ 1.79
RB1P06400 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RB1P06400 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RB1P06400 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RB1P06400 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RB1P06400 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RB1P06400 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.25■■□□□ 1.79
RB1P06400 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RB1P06400 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RB1P06400 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RB1P06400 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.24■■□□□ 1.79
RB1P06400 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RB1P06400 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RB1P06400 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.24■■□□□ 1.79
RB1P06400 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.24■■□□□ 1.79
RB1P06400 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RB1P06400 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.23■■□□□ 1.79
RB1P06400 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms