Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
LTN1O94822 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
LTN1O94822 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
LTN1O94822 HYI-210ENST00000486909 905 ntTSL 5 BASIC33.22■■■□□ 2.91
LTN1O94822 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
LTN1O94822 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
LTN1O94822 IDNK-203ENST00000405990 629 ntTSL 2 BASIC33.21■■■□□ 2.91
LTN1O94822 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC33.21■■■□□ 2.91
LTN1O94822 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC33.21■■■□□ 2.91
LTN1O94822 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
LTN1O94822 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC33.21■■■□□ 2.91
LTN1O94822 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
LTN1O94822 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC33.2■■■□□ 2.91
LTN1O94822 AC103724.3-201ENST00000564481 992 ntBASIC33.2■■■□□ 2.91
LTN1O94822 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC33.2■■■□□ 2.9
LTN1O94822 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC33.19■■■□□ 2.9
LTN1O94822 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
LTN1O94822 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
LTN1O94822 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC33.19■■■□□ 2.9
LTN1O94822 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
LTN1O94822 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC33.17■■■□□ 2.9
LTN1O94822 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
LTN1O94822 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC33.17■■■□□ 2.9
LTN1O94822 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC33.16■■■□□ 2.9
LTN1O94822 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
LTN1O94822 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
LTN1O94822 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC33.16■■■□□ 2.9
LTN1O94822 PROC-203ENST00000409048 1586 ntTSL 5 BASIC33.16■■■□□ 2.9
LTN1O94822 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
LTN1O94822 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC33.16■■■□□ 2.9
LTN1O94822 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
LTN1O94822 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
LTN1O94822 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC33.14■■■□□ 2.9
LTN1O94822 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
LTN1O94822 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
LTN1O94822 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
LTN1O94822 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
LTN1O94822 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
LTN1O94822 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC33.13■■■□□ 2.89
LTN1O94822 AC103834.1-201ENST00000520383 144 ntBASIC33.13■■■□□ 2.89
LTN1O94822 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
LTN1O94822 AC074183.2-201ENST00000623112 922 ntBASIC33.13■■■□□ 2.89
LTN1O94822 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
LTN1O94822 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
LTN1O94822 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
LTN1O94822 BHLHE23-202ENST00000612929 1109 ntBASIC33.12■■■□□ 2.89
LTN1O94822 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC33.12■■■□□ 2.89
LTN1O94822 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC33.11■■■□□ 2.89
LTN1O94822 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
LTN1O94822 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC33.11■■■□□ 2.89
LTN1O94822 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
LTN1O94822 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
LTN1O94822 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
LTN1O94822 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC33.1■■■□□ 2.89
LTN1O94822 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC33.1■■■□□ 2.89
LTN1O94822 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC33.09■■■□□ 2.89
LTN1O94822 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
LTN1O94822 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC33.09■■■□□ 2.89
LTN1O94822 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
LTN1O94822 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC33.08■■■□□ 2.89
LTN1O94822 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
LTN1O94822 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC33.08■■■□□ 2.89
LTN1O94822 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC33.08■■■□□ 2.89
LTN1O94822 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC33.08■■■□□ 2.89
LTN1O94822 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
LTN1O94822 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
LTN1O94822 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
LTN1O94822 ST7-202ENST00000323984 2142 ntTSL 5 BASIC33.06■■■□□ 2.88
LTN1O94822 ST7-207ENST00000393449 2127 ntTSL 5 BASIC33.06■■■□□ 2.88
LTN1O94822 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
LTN1O94822 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC33.06■■■□□ 2.88
LTN1O94822 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
LTN1O94822 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
LTN1O94822 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
LTN1O94822 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
LTN1O94822 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
LTN1O94822 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
LTN1O94822 ST7-205ENST00000393446 2114 ntTSL 5 BASIC33.04■■■□□ 2.88
LTN1O94822 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC33.04■■■□□ 2.88
LTN1O94822 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC33.03■■■□□ 2.88
LTN1O94822 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC33.03■■■□□ 2.88
LTN1O94822 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
LTN1O94822 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
LTN1O94822 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
LTN1O94822 IDNK-201ENST00000376417 511 ntTSL 5 BASIC33.02■■■□□ 2.88
LTN1O94822 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
LTN1O94822 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
LTN1O94822 GUSBP5-201ENST00000418136 578 ntBASIC33.01■■■□□ 2.88
LTN1O94822 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.88
LTN1O94822 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
LTN1O94822 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
LTN1O94822 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
LTN1O94822 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC33■■■□□ 2.87
LTN1O94822 DRD5P2-201ENST00000421395 2012 ntBASIC33■■■□□ 2.87
LTN1O94822 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
LTN1O94822 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC33■■■□□ 2.87
LTN1O94822 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC32.99■■■□□ 2.87
LTN1O94822 YBX1P4-201ENST00000392794 808 ntBASIC32.99■■■□□ 2.87
LTN1O94822 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
LTN1O94822 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms