Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3L4A6NDZ8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
MBD3L4A6NDZ8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3L4A6NDZ8 LINC01003-201ENST00000564834 1764 ntBASIC21.84■■□□□ 1.09
MBD3L4A6NDZ8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.83■■□□□ 1.09
MBD3L4A6NDZ8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MBD3L4A6NDZ8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 SPCS2P3-201ENST00000500401 656 ntBASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD3L4A6NDZ8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.8■■□□□ 1.08
MBD3L4A6NDZ8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.79■■□□□ 1.08
MBD3L4A6NDZ8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.79■■□□□ 1.08
MBD3L4A6NDZ8 MIR6765-201ENST00000614092 87 ntBASIC21.79■■□□□ 1.08
MBD3L4A6NDZ8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.79■■□□□ 1.08
MBD3L4A6NDZ8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD3L4A6NDZ8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 AL449106.1-201ENST00000608517 1980 ntBASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
MBD3L4A6NDZ8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MBD3L4A6NDZ8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.77■■□□□ 1.08
MBD3L4A6NDZ8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
MBD3L4A6NDZ8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD3L4A6NDZ8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD3L4A6NDZ8 AC018755.3-202ENST00000596210 929 ntBASIC21.76■■□□□ 1.07
MBD3L4A6NDZ8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MBD3L4A6NDZ8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD3L4A6NDZ8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 RARRES2P1-201ENST00000474487 481 ntBASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 AC074183.2-201ENST00000623112 922 ntBASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
MBD3L4A6NDZ8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3L4A6NDZ8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3L4A6NDZ8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD3L4A6NDZ8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD3L4A6NDZ8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 BHLHE23-202ENST00000612929 1109 ntBASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 BX255925.1-201ENST00000566954 1854 ntBASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 AC139795.1-202ENST00000500444 432 ntBASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms