Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.2■□□□□ 0.82
TMEM56-RWDD3S4R434 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM56-RWDD3S4R434 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TMEM56-RWDD3S4R434 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM56-RWDD3S4R434 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM56-RWDD3S4R434 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM56-RWDD3S4R434 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM56-RWDD3S4R434 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
TMEM56-RWDD3S4R434 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
TMEM56-RWDD3S4R434 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM56-RWDD3S4R434 AC005559.1-201ENST00000589661 871 ntBASIC20.18■□□□□ 0.82
TMEM56-RWDD3S4R434 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM56-RWDD3S4R434 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM56-RWDD3S4R434 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM56-RWDD3S4R434 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM56-RWDD3S4R434 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM56-RWDD3S4R434 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM56-RWDD3S4R434 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM56-RWDD3S4R434 MIR6090-201ENST00000622481 60 ntBASIC20.17■□□□□ 0.82
TMEM56-RWDD3S4R434 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM56-RWDD3S4R434 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM56-RWDD3S4R434 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM56-RWDD3S4R434 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM56-RWDD3S4R434 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM56-RWDD3S4R434 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TMEM56-RWDD3S4R434 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM56-RWDD3S4R434 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM56-RWDD3S4R434 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM56-RWDD3S4R434 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM56-RWDD3S4R434 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM56-RWDD3S4R434 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TMEM56-RWDD3S4R434 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.15■□□□□ 0.82
TMEM56-RWDD3S4R434 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TMEM56-RWDD3S4R434 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM56-RWDD3S4R434 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.14■□□□□ 0.81
TMEM56-RWDD3S4R434 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM56-RWDD3S4R434 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM56-RWDD3S4R434 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM56-RWDD3S4R434 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM56-RWDD3S4R434 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM56-RWDD3S4R434 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM56-RWDD3S4R434 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM56-RWDD3S4R434 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.12■□□□□ 0.81
TMEM56-RWDD3S4R434 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
TMEM56-RWDD3S4R434 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM56-RWDD3S4R434 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM56-RWDD3S4R434 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.12■□□□□ 0.81
TMEM56-RWDD3S4R434 ERN1-208ENST00000606895 2068 ntBASIC20.12■□□□□ 0.81
TMEM56-RWDD3S4R434 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM56-RWDD3S4R434 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM56-RWDD3S4R434 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TMEM56-RWDD3S4R434 WHAMMP3-201ENST00000611636 1609 ntBASIC20.11■□□□□ 0.81
TMEM56-RWDD3S4R434 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM56-RWDD3S4R434 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM56-RWDD3S4R434 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM56-RWDD3S4R434 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.1■□□□□ 0.81
TMEM56-RWDD3S4R434 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TMEM56-RWDD3S4R434 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEM56-RWDD3S4R434 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TMEM56-RWDD3S4R434 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56-RWDD3S4R434 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56-RWDD3S4R434 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56-RWDD3S4R434 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM56-RWDD3S4R434 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM56-RWDD3S4R434 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEM56-RWDD3S4R434 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM56-RWDD3S4R434 AC010501.1-201ENST00000606270 1962 ntBASIC20.08■□□□□ 0.8
TMEM56-RWDD3S4R434 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.08■□□□□ 0.8
TMEM56-RWDD3S4R434 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56-RWDD3S4R434 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56-RWDD3S4R434 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56-RWDD3S4R434 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM56-RWDD3S4R434 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM56-RWDD3S4R434 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.07■□□□□ 0.8
TMEM56-RWDD3S4R434 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TMEM56-RWDD3S4R434 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TMEM56-RWDD3S4R434 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM56-RWDD3S4R434 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM56-RWDD3S4R434 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM56-RWDD3S4R434 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM56-RWDD3S4R434 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56-RWDD3S4R434 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56-RWDD3S4R434 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56-RWDD3S4R434 AC142381.3-201ENST00000568208 1670 ntBASIC20.05■□□□□ 0.8
TMEM56-RWDD3S4R434 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM56-RWDD3S4R434 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
TMEM56-RWDD3S4R434 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM56-RWDD3S4R434 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TMEM56-RWDD3S4R434 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM56-RWDD3S4R434 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM56-RWDD3S4R434 AC110285.7-201ENST00000624417 1536 ntBASIC20.04■□□□□ 0.8
TMEM56-RWDD3S4R434 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM56-RWDD3S4R434 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM56-RWDD3S4R434 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM56-RWDD3S4R434 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM56-RWDD3S4R434 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56-RWDD3S4R434 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56-RWDD3S4R434 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM56-RWDD3S4R434 SUZ12P1-203ENST00000578195 985 ntBASIC20.02■□□□□ 0.8
TMEM56-RWDD3S4R434 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms