Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 C9orf163-202ENST00000624034 2573 ntBASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC12.94□□□□□ -0.34
CDC42SE1Q9NRR8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE1Q9NRR8 ABCB10P4-201ENST00000566803 2184 ntBASIC12.93□□□□□ -0.34
CDC42SE1Q9NRR8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE1Q9NRR8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDC42SE1Q9NRR8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CDC42SE1Q9NRR8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 AC120057.4-201ENST00000624722 1615 ntBASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC12.91□□□□□ -0.34
CDC42SE1Q9NRR8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CDC42SE1Q9NRR8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CDC42SE1Q9NRR8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC12.9□□□□□ -0.35
CDC42SE1Q9NRR8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 AC092803.2-201ENST00000564287 1899 ntBASIC12.89□□□□□ -0.35
CDC42SE1Q9NRR8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 AC145676.1-201ENST00000514988 2004 ntBASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CDC42SE1Q9NRR8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE1Q9NRR8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE1Q9NRR8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CDC42SE1Q9NRR8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE1Q9NRR8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC42SE1Q9NRR8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE1Q9NRR8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE1Q9NRR8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE1Q9NRR8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms