Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NSUN3Q9H649 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.58■■□□□ 1.84
NSUN3Q9H649 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NSUN3Q9H649 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.57■■□□□ 1.84
NSUN3Q9H649 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
NSUN3Q9H649 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.56■■□□□ 1.84
NSUN3Q9H649 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NSUN3Q9H649 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.55■■□□□ 1.84
NSUN3Q9H649 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.55■■□□□ 1.84
NSUN3Q9H649 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
NSUN3Q9H649 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
NSUN3Q9H649 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
NSUN3Q9H649 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.53■■□□□ 1.84
NSUN3Q9H649 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
NSUN3Q9H649 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NSUN3Q9H649 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.53■■□□□ 1.84
NSUN3Q9H649 PVT1_1.1-201ENST00000615125 194 ntBASIC26.53■■□□□ 1.84
NSUN3Q9H649 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.53■■□□□ 1.84
NSUN3Q9H649 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NSUN3Q9H649 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
NSUN3Q9H649 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
NSUN3Q9H649 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
NSUN3Q9H649 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NSUN3Q9H649 MIR3960-201ENST00000583311 91 ntBASIC26.52■■□□□ 1.84
NSUN3Q9H649 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.52■■□□□ 1.84
NSUN3Q9H649 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.52■■□□□ 1.84
NSUN3Q9H649 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NSUN3Q9H649 AC018755.3-202ENST00000596210 929 ntBASIC26.51■■□□□ 1.83
NSUN3Q9H649 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
NSUN3Q9H649 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
NSUN3Q9H649 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.5■■□□□ 1.83
NSUN3Q9H649 MIR4508-201ENST00000584178 70 ntBASIC26.5■■□□□ 1.83
NSUN3Q9H649 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.5■■□□□ 1.83
NSUN3Q9H649 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NSUN3Q9H649 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.49■■□□□ 1.83
NSUN3Q9H649 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.48■■□□□ 1.83
NSUN3Q9H649 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.48■■□□□ 1.83
NSUN3Q9H649 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NSUN3Q9H649 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.48■■□□□ 1.83
NSUN3Q9H649 AP004833.2-201ENST00000532228 1454 ntBASIC26.48■■□□□ 1.83
NSUN3Q9H649 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NSUN3Q9H649 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NSUN3Q9H649 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NSUN3Q9H649 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NSUN3Q9H649 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
NSUN3Q9H649 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NSUN3Q9H649 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.46■■□□□ 1.83
NSUN3Q9H649 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NSUN3Q9H649 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
NSUN3Q9H649 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.45■■□□□ 1.82
NSUN3Q9H649 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.45■■□□□ 1.82
NSUN3Q9H649 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NSUN3Q9H649 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.45■■□□□ 1.82
NSUN3Q9H649 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
NSUN3Q9H649 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.44■■□□□ 1.82
NSUN3Q9H649 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
NSUN3Q9H649 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.44■■□□□ 1.82
NSUN3Q9H649 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.44■■□□□ 1.82
NSUN3Q9H649 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
NSUN3Q9H649 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
NSUN3Q9H649 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
NSUN3Q9H649 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
NSUN3Q9H649 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NSUN3Q9H649 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
NSUN3Q9H649 AL356441.2-201ENST00000443009 864 ntBASIC26.42■■□□□ 1.82
NSUN3Q9H649 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.42■■□□□ 1.82
NSUN3Q9H649 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.42■■□□□ 1.82
NSUN3Q9H649 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.42■■□□□ 1.82
NSUN3Q9H649 AL031848.2-201ENST00000607670 837 ntBASIC26.41■■□□□ 1.82
NSUN3Q9H649 AC100797.4-201ENST00000631653 1827 ntBASIC26.4■■□□□ 1.82
NSUN3Q9H649 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.4■■□□□ 1.82
NSUN3Q9H649 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
NSUN3Q9H649 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.4■■□□□ 1.82
NSUN3Q9H649 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NSUN3Q9H649 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.4■■□□□ 1.82
NSUN3Q9H649 AC103724.3-201ENST00000564481 992 ntBASIC26.4■■□□□ 1.82
NSUN3Q9H649 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NSUN3Q9H649 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NSUN3Q9H649 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NSUN3Q9H649 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
NSUN3Q9H649 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
NSUN3Q9H649 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NSUN3Q9H649 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NSUN3Q9H649 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
NSUN3Q9H649 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
NSUN3Q9H649 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
NSUN3Q9H649 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
NSUN3Q9H649 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
NSUN3Q9H649 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.38■■□□□ 1.81
NSUN3Q9H649 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NSUN3Q9H649 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.38■■□□□ 1.81
NSUN3Q9H649 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NSUN3Q9H649 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.37■■□□□ 1.81
NSUN3Q9H649 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NSUN3Q9H649 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.36■■□□□ 1.81
NSUN3Q9H649 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NSUN3Q9H649 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
NSUN3Q9H649 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.34■■□□□ 1.81
NSUN3Q9H649 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.34■■□□□ 1.81
NSUN3Q9H649 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms