Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
EXD3Q8N9H8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EXD3Q8N9H8 AC009299.2-201ENST00000482477 511 ntBASIC23.33■■□□□ 1.33
EXD3Q8N9H8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.33■■□□□ 1.33
EXD3Q8N9H8 KRT8P33-201ENST00000508125 1423 ntBASIC23.33■■□□□ 1.32
EXD3Q8N9H8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
EXD3Q8N9H8 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.33■■□□□ 1.32
EXD3Q8N9H8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EXD3Q8N9H8 AC010980.1-201ENST00000587192 1142 ntBASIC23.32■■□□□ 1.32
EXD3Q8N9H8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
EXD3Q8N9H8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.32■■□□□ 1.32
EXD3Q8N9H8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
EXD3Q8N9H8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
EXD3Q8N9H8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
EXD3Q8N9H8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.31■■□□□ 1.32
EXD3Q8N9H8 THA1P-201ENST00000590384 1145 ntBASIC23.31■■□□□ 1.32
EXD3Q8N9H8 BHLHE23-202ENST00000612929 1109 ntBASIC23.31■■□□□ 1.32
EXD3Q8N9H8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
EXD3Q8N9H8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
EXD3Q8N9H8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EXD3Q8N9H8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EXD3Q8N9H8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
EXD3Q8N9H8 AC142086.6-201ENST00000621154 1765 ntBASIC23.3■■□□□ 1.32
EXD3Q8N9H8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
EXD3Q8N9H8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
EXD3Q8N9H8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
EXD3Q8N9H8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
EXD3Q8N9H8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.29■■□□□ 1.32
EXD3Q8N9H8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
EXD3Q8N9H8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
EXD3Q8N9H8 RP9P-202ENST00000450133 1212 ntBASIC23.29■■□□□ 1.32
EXD3Q8N9H8 AC026202.3-201ENST00000600805 1127 ntBASIC23.29■■□□□ 1.32
EXD3Q8N9H8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
EXD3Q8N9H8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
EXD3Q8N9H8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
EXD3Q8N9H8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
EXD3Q8N9H8 DUX4L9-201ENST00000449051 1259 ntBASIC23.28■■□□□ 1.32
EXD3Q8N9H8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
EXD3Q8N9H8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
EXD3Q8N9H8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.28■■□□□ 1.32
EXD3Q8N9H8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
EXD3Q8N9H8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
EXD3Q8N9H8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.27■■□□□ 1.32
EXD3Q8N9H8 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.27■■□□□ 1.32
EXD3Q8N9H8 SMPD5-203ENST00000639008 1464 ntBASIC23.27■■□□□ 1.32
EXD3Q8N9H8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.27■■□□□ 1.32
EXD3Q8N9H8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.26■■□□□ 1.31
EXD3Q8N9H8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.26■■□□□ 1.31
EXD3Q8N9H8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
EXD3Q8N9H8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.25■■□□□ 1.31
EXD3Q8N9H8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
EXD3Q8N9H8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.25■■□□□ 1.31
EXD3Q8N9H8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
EXD3Q8N9H8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
EXD3Q8N9H8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
EXD3Q8N9H8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EXD3Q8N9H8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EXD3Q8N9H8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EXD3Q8N9H8 AC074183.2-201ENST00000623112 922 ntBASIC23.23■■□□□ 1.31
EXD3Q8N9H8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EXD3Q8N9H8 DRD5P2-201ENST00000421395 2012 ntBASIC23.23■■□□□ 1.31
EXD3Q8N9H8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
EXD3Q8N9H8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
EXD3Q8N9H8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
EXD3Q8N9H8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
EXD3Q8N9H8 GUSBP5-201ENST00000418136 578 ntBASIC23.22■■□□□ 1.31
EXD3Q8N9H8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.22■■□□□ 1.31
EXD3Q8N9H8 AC103834.1-201ENST00000520383 144 ntBASIC23.22■■□□□ 1.31
EXD3Q8N9H8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
EXD3Q8N9H8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
EXD3Q8N9H8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.22■■□□□ 1.31
EXD3Q8N9H8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
EXD3Q8N9H8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
EXD3Q8N9H8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
EXD3Q8N9H8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
EXD3Q8N9H8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.2■■□□□ 1.3
EXD3Q8N9H8 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.2■■□□□ 1.3
EXD3Q8N9H8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
EXD3Q8N9H8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
EXD3Q8N9H8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
EXD3Q8N9H8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.19■■□□□ 1.3
EXD3Q8N9H8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
EXD3Q8N9H8 MIR935-201ENST00000401179 91 ntBASIC23.19■■□□□ 1.3
EXD3Q8N9H8 SPCS2P3-201ENST00000500401 656 ntBASIC23.19■■□□□ 1.3
EXD3Q8N9H8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
EXD3Q8N9H8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
EXD3Q8N9H8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.19■■□□□ 1.3
EXD3Q8N9H8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
EXD3Q8N9H8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.18■■□□□ 1.3
EXD3Q8N9H8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.18■■□□□ 1.3
EXD3Q8N9H8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
EXD3Q8N9H8 YBX1P4-201ENST00000392794 808 ntBASIC23.18■■□□□ 1.3
EXD3Q8N9H8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
EXD3Q8N9H8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
EXD3Q8N9H8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
EXD3Q8N9H8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.18■■□□□ 1.3
EXD3Q8N9H8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
EXD3Q8N9H8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
EXD3Q8N9H8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.17■■□□□ 1.3
EXD3Q8N9H8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms