Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS52Q8N1B4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS52Q8N1B4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
VPS52Q8N1B4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
VPS52Q8N1B4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
VPS52Q8N1B4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
VPS52Q8N1B4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
VPS52Q8N1B4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
VPS52Q8N1B4 DUX4L18-201ENST00000553347 1267 ntBASIC26.75■■□□□ 1.87
VPS52Q8N1B4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
VPS52Q8N1B4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
VPS52Q8N1B4 AL139393.2-201ENST00000608721 2025 ntBASIC26.75■■□□□ 1.87
VPS52Q8N1B4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
VPS52Q8N1B4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VPS52Q8N1B4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.73■■□□□ 1.87
VPS52Q8N1B4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.73■■□□□ 1.87
VPS52Q8N1B4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.73■■□□□ 1.87
VPS52Q8N1B4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VPS52Q8N1B4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.72■■□□□ 1.87
VPS52Q8N1B4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.71■■□□□ 1.87
VPS52Q8N1B4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
VPS52Q8N1B4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.7■■□□□ 1.87
VPS52Q8N1B4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
VPS52Q8N1B4 AC026202.3-201ENST00000600805 1127 ntBASIC26.7■■□□□ 1.86
VPS52Q8N1B4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.7■■□□□ 1.86
VPS52Q8N1B4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VPS52Q8N1B4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
VPS52Q8N1B4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.68■■□□□ 1.86
VPS52Q8N1B4 AC025884.2-201ENST00000553429 711 ntBASIC26.68■■□□□ 1.86
VPS52Q8N1B4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
VPS52Q8N1B4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
VPS52Q8N1B4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS52Q8N1B4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS52Q8N1B4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
VPS52Q8N1B4 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.67■■□□□ 1.86
VPS52Q8N1B4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.67■■□□□ 1.86
VPS52Q8N1B4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS52Q8N1B4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS52Q8N1B4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
VPS52Q8N1B4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.66■■□□□ 1.86
VPS52Q8N1B4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS52Q8N1B4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VPS52Q8N1B4 RP9P-202ENST00000450133 1212 ntBASIC26.64■■□□□ 1.86
VPS52Q8N1B4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS52Q8N1B4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS52Q8N1B4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS52Q8N1B4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.63■■□□□ 1.85
VPS52Q8N1B4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
VPS52Q8N1B4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 AC093536.1-201ENST00000569153 554 ntBASIC26.61■■□□□ 1.85
VPS52Q8N1B4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
VPS52Q8N1B4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS52Q8N1B4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS52Q8N1B4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.6■■□□□ 1.85
VPS52Q8N1B4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
VPS52Q8N1B4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.59■■□□□ 1.85
VPS52Q8N1B4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
VPS52Q8N1B4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS52Q8N1B4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS52Q8N1B4 AP002414.2-202ENST00000590929 1450 ntBASIC26.58■■□□□ 1.85
VPS52Q8N1B4 DUX4L9-201ENST00000449051 1259 ntBASIC26.58■■□□□ 1.85
VPS52Q8N1B4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS52Q8N1B4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS52Q8N1B4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS52Q8N1B4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.57■■□□□ 1.84
VPS52Q8N1B4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms