Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SIX5Q8N196 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SIX5Q8N196 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SIX5Q8N196 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SIX5Q8N196 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.57■■□□□ 1.68
SIX5Q8N196 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SIX5Q8N196 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SIX5Q8N196 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SIX5Q8N196 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SIX5Q8N196 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.56■■□□□ 1.68
SIX5Q8N196 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.56■■□□□ 1.68
SIX5Q8N196 AL356441.2-201ENST00000443009 864 ntBASIC25.56■■□□□ 1.68
SIX5Q8N196 MIR4508-201ENST00000584178 70 ntBASIC25.56■■□□□ 1.68
SIX5Q8N196 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.56■■□□□ 1.68
SIX5Q8N196 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
SIX5Q8N196 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SIX5Q8N196 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SIX5Q8N196 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.55■■□□□ 1.68
SIX5Q8N196 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SIX5Q8N196 MIR3960-201ENST00000583311 91 ntBASIC25.55■■□□□ 1.68
SIX5Q8N196 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SIX5Q8N196 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.54■■□□□ 1.68
SIX5Q8N196 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SIX5Q8N196 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SIX5Q8N196 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SIX5Q8N196 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.54■■□□□ 1.68
SIX5Q8N196 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.54■■□□□ 1.68
SIX5Q8N196 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SIX5Q8N196 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SIX5Q8N196 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.53■■□□□ 1.68
SIX5Q8N196 MIR935-201ENST00000401179 91 ntBASIC25.52■■□□□ 1.68
SIX5Q8N196 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.52■■□□□ 1.68
SIX5Q8N196 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
SIX5Q8N196 AL031848.2-201ENST00000607670 837 ntBASIC25.52■■□□□ 1.68
SIX5Q8N196 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SIX5Q8N196 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SIX5Q8N196 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SIX5Q8N196 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SIX5Q8N196 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SIX5Q8N196 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.5■■□□□ 1.67
SIX5Q8N196 AC103724.3-201ENST00000564481 992 ntBASIC25.5■■□□□ 1.67
SIX5Q8N196 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SIX5Q8N196 AC100797.4-201ENST00000631653 1827 ntBASIC25.49■■□□□ 1.67
SIX5Q8N196 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.49■■□□□ 1.67
SIX5Q8N196 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SIX5Q8N196 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SIX5Q8N196 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
SIX5Q8N196 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SIX5Q8N196 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.47■■□□□ 1.67
SIX5Q8N196 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SIX5Q8N196 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
SIX5Q8N196 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
SIX5Q8N196 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.47■■□□□ 1.67
SIX5Q8N196 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.47■■□□□ 1.67
SIX5Q8N196 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
SIX5Q8N196 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SIX5Q8N196 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.46■■□□□ 1.67
SIX5Q8N196 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.46■■□□□ 1.67
SIX5Q8N196 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SIX5Q8N196 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
SIX5Q8N196 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SIX5Q8N196 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SIX5Q8N196 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
SIX5Q8N196 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SIX5Q8N196 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SIX5Q8N196 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.44■■□□□ 1.66
SIX5Q8N196 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SIX5Q8N196 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SIX5Q8N196 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.44■■□□□ 1.66
SIX5Q8N196 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SIX5Q8N196 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.44■■□□□ 1.66
SIX5Q8N196 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.44■■□□□ 1.66
SIX5Q8N196 AP004833.2-201ENST00000532228 1454 ntBASIC25.44■■□□□ 1.66
SIX5Q8N196 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
SIX5Q8N196 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SIX5Q8N196 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.43■■□□□ 1.66
SIX5Q8N196 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
SIX5Q8N196 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SIX5Q8N196 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SIX5Q8N196 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
SIX5Q8N196 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SIX5Q8N196 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.41■■□□□ 1.66
SIX5Q8N196 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SIX5Q8N196 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.4■■□□□ 1.66
SIX5Q8N196 AC239859.2-201ENST00000444165 318 ntBASIC25.4■■□□□ 1.66
SIX5Q8N196 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
SIX5Q8N196 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
SIX5Q8N196 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
SIX5Q8N196 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SIX5Q8N196 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.39■■□□□ 1.66
SIX5Q8N196 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
SIX5Q8N196 AC008406.3-201ENST00000620001 1374 ntBASIC25.38■■□□□ 1.65
SIX5Q8N196 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.37■■□□□ 1.65
SIX5Q8N196 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SIX5Q8N196 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.37■■□□□ 1.65
SIX5Q8N196 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.36■■□□□ 1.65
SIX5Q8N196 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SIX5Q8N196 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.36■■□□□ 1.65
SIX5Q8N196 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SIX5Q8N196 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 252.5 ms