Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC15.74■□□□□ 0.11
MRPL55Q7Z7F7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 RPS2P35-201ENST00000443417 897 ntBASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 AL449106.1-201ENST00000608517 1980 ntBASIC15.73■□□□□ 0.11
MRPL55Q7Z7F7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 LINC01971-201ENST00000617888 1048 ntBASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC15.72■□□□□ 0.11
MRPL55Q7Z7F7 AP004609.3-201ENST00000610705 1884 ntBASIC15.71■□□□□ 0.11
MRPL55Q7Z7F7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC15.71■□□□□ 0.11
MRPL55Q7Z7F7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MRPL55Q7Z7F7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC15.71■□□□□ 0.11
MRPL55Q7Z7F7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC15.71■□□□□ 0.11
MRPL55Q7Z7F7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MRPL55Q7Z7F7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC15.71■□□□□ 0.11
MRPL55Q7Z7F7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MRPL55Q7Z7F7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MRPL55Q7Z7F7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 WHAMMP3-201ENST00000611636 1609 ntBASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC15.7■□□□□ 0.1
MRPL55Q7Z7F7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPL55Q7Z7F7 CHML-204ENST00000638121 920 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPL55Q7Z7F7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MRPL55Q7Z7F7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL55Q7Z7F7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL55Q7Z7F7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL55Q7Z7F7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MRPL55Q7Z7F7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC15.68■□□□□ 0.1
MRPL55Q7Z7F7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPL55Q7Z7F7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPL55Q7Z7F7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MRPL55Q7Z7F7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL55Q7Z7F7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MRPL55Q7Z7F7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPL55Q7Z7F7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MRPL55Q7Z7F7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MRPL55Q7Z7F7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPL55Q7Z7F7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MRPL55Q7Z7F7 AC091060.1-201ENST00000623524 1766 ntBASIC15.65■□□□□ 0.1
MRPL55Q7Z7F7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MRPL55Q7Z7F7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.65■□□□□ 0.1
MRPL55Q7Z7F7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
MRPL55Q7Z7F7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
MRPL55Q7Z7F7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC15.65■□□□□ 0.1
MRPL55Q7Z7F7 AC142472.1-201ENST00000612013 1741 ntBASIC15.65■□□□□ 0.1
MRPL55Q7Z7F7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 DUX4L13-201ENST00000554103 1267 ntBASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 DUX4L15-201ENST00000611059 1267 ntBASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 DUX4L23-201ENST00000615195 1269 ntBASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 DUX4L24-201ENST00000617576 1269 ntBASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 DUX4L22-201ENST00000618238 1269 ntBASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 DUX4L20-201ENST00000619712 1269 ntBASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 DUX4L21-201ENST00000622058 1269 ntBASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 DUX4L10-201ENST00000622460 1267 ntBASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 DUX4L25-201ENST00000624915 1269 ntBASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC15.64■□□□□ 0.09
MRPL55Q7Z7F7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC15.63■□□□□ 0.09
MRPL55Q7Z7F7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms