Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.58■□□□□ 0.88
ZNF880Q6PDB4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.58■□□□□ 0.88
ZNF880Q6PDB4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF880Q6PDB4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF880Q6PDB4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF880Q6PDB4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF880Q6PDB4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF880Q6PDB4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF880Q6PDB4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF880Q6PDB4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF880Q6PDB4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF880Q6PDB4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF880Q6PDB4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF880Q6PDB4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF880Q6PDB4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF880Q6PDB4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF880Q6PDB4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF880Q6PDB4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF880Q6PDB4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF880Q6PDB4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF880Q6PDB4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF880Q6PDB4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 LINC01971-201ENST00000617888 1048 ntBASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF880Q6PDB4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF880Q6PDB4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF880Q6PDB4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF880Q6PDB4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF880Q6PDB4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF880Q6PDB4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF880Q6PDB4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF880Q6PDB4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF880Q6PDB4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ZNF880Q6PDB4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF880Q6PDB4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF880Q6PDB4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF880Q6PDB4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF880Q6PDB4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF880Q6PDB4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ZNF880Q6PDB4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ZNF880Q6PDB4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF880Q6PDB4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF880Q6PDB4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF880Q6PDB4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ZNF880Q6PDB4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF880Q6PDB4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 DUX4L13-201ENST00000554103 1267 ntBASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 DUX4L15-201ENST00000611059 1267 ntBASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 DUX4L23-201ENST00000615195 1269 ntBASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 DUX4L24-201ENST00000617576 1269 ntBASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 DUX4L22-201ENST00000618238 1269 ntBASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 DUX4L20-201ENST00000619712 1269 ntBASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 DUX4L21-201ENST00000622058 1269 ntBASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 DUX4L10-201ENST00000622460 1267 ntBASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 DUX4L25-201ENST00000624915 1269 ntBASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF880Q6PDB4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 RPS2P35-201ENST00000443417 897 ntBASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 AC020928.2-201ENST00000588717 2197 ntBASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF880Q6PDB4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms