Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC38.31■■■■□ 3.72
CDC42BPAQ5VT25 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC38.31■■■■□ 3.72
CDC42BPAQ5VT25 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC38.28■■■■□ 3.72
CDC42BPAQ5VT25 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC38.27■■■■□ 3.72
CDC42BPAQ5VT25 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC38.27■■■■□ 3.72
CDC42BPAQ5VT25 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC38.27■■■■□ 3.72
CDC42BPAQ5VT25 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC38.27■■■■□ 3.72
CDC42BPAQ5VT25 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC38.27■■■■□ 3.72
CDC42BPAQ5VT25 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC38.27■■■■□ 3.72
CDC42BPAQ5VT25 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
CDC42BPAQ5VT25 MIR3960-201ENST00000583311 91 ntBASIC38.26■■■■□ 3.72
CDC42BPAQ5VT25 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
CDC42BPAQ5VT25 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
CDC42BPAQ5VT25 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC38.26■■■■□ 3.71
CDC42BPAQ5VT25 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC38.26■■■■□ 3.71
CDC42BPAQ5VT25 PVT1_1.1-201ENST00000615125 194 ntBASIC38.24■■■■□ 3.71
CDC42BPAQ5VT25 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC38.23■■■■□ 3.71
CDC42BPAQ5VT25 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC38.23■■■■□ 3.71
CDC42BPAQ5VT25 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC38.22■■■■□ 3.71
CDC42BPAQ5VT25 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC38.21■■■■□ 3.71
CDC42BPAQ5VT25 AC009299.2-201ENST00000482477 511 ntBASIC38.21■■■■□ 3.71
CDC42BPAQ5VT25 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CDC42BPAQ5VT25 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CDC42BPAQ5VT25 MIR6765-201ENST00000614092 87 ntBASIC38.2■■■■□ 3.71
CDC42BPAQ5VT25 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
CDC42BPAQ5VT25 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC38.19■■■■□ 3.7
CDC42BPAQ5VT25 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
CDC42BPAQ5VT25 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC38.18■■■■□ 3.7
CDC42BPAQ5VT25 AC010980.1-201ENST00000587192 1142 ntBASIC38.18■■■■□ 3.7
CDC42BPAQ5VT25 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
CDC42BPAQ5VT25 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC38.18■■■■□ 3.7
CDC42BPAQ5VT25 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
CDC42BPAQ5VT25 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
CDC42BPAQ5VT25 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
CDC42BPAQ5VT25 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC38.17■■■■□ 3.7
CDC42BPAQ5VT25 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
CDC42BPAQ5VT25 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
CDC42BPAQ5VT25 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
CDC42BPAQ5VT25 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC38.15■■■■□ 3.7
CDC42BPAQ5VT25 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC38.15■■■■□ 3.7
CDC42BPAQ5VT25 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC38.15■■■■□ 3.7
CDC42BPAQ5VT25 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
CDC42BPAQ5VT25 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC38.15■■■■□ 3.7
CDC42BPAQ5VT25 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
CDC42BPAQ5VT25 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
CDC42BPAQ5VT25 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC38.14■■■■□ 3.7
CDC42BPAQ5VT25 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
CDC42BPAQ5VT25 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC38.13■■■■□ 3.7
CDC42BPAQ5VT25 KRT8P33-201ENST00000508125 1423 ntBASIC38.13■■■■□ 3.69
CDC42BPAQ5VT25 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
CDC42BPAQ5VT25 MIR4508-201ENST00000584178 70 ntBASIC38.12■■■■□ 3.69
CDC42BPAQ5VT25 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC38.12■■■■□ 3.69
CDC42BPAQ5VT25 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
CDC42BPAQ5VT25 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
CDC42BPAQ5VT25 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC38.11■■■■□ 3.69
CDC42BPAQ5VT25 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC38.11■■■■□ 3.69
CDC42BPAQ5VT25 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC38.11■■■■□ 3.69
CDC42BPAQ5VT25 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC38.11■■■■□ 3.69
CDC42BPAQ5VT25 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC38.1■■■■□ 3.69
CDC42BPAQ5VT25 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
CDC42BPAQ5VT25 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC38.1■■■■□ 3.69
CDC42BPAQ5VT25 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
CDC42BPAQ5VT25 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC38.09■■■■□ 3.69
CDC42BPAQ5VT25 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
CDC42BPAQ5VT25 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC38.09■■■■□ 3.69
CDC42BPAQ5VT25 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC38.09■■■■□ 3.69
CDC42BPAQ5VT25 AL359504.2-201ENST00000605506 1601 ntBASIC38.08■■■■□ 3.69
CDC42BPAQ5VT25 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC38.08■■■■□ 3.69
CDC42BPAQ5VT25 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
CDC42BPAQ5VT25 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
CDC42BPAQ5VT25 AC139795.1-202ENST00000500444 432 ntBASIC38.07■■■■□ 3.68
CDC42BPAQ5VT25 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC38.06■■■■□ 3.68
CDC42BPAQ5VT25 AC103834.1-201ENST00000520383 144 ntBASIC38.06■■■■□ 3.68
CDC42BPAQ5VT25 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC38.06■■■■□ 3.68
CDC42BPAQ5VT25 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC38.05■■■■□ 3.68
CDC42BPAQ5VT25 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
CDC42BPAQ5VT25 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
CDC42BPAQ5VT25 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC38.05■■■■□ 3.68
CDC42BPAQ5VT25 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
CDC42BPAQ5VT25 IDNK-203ENST00000405990 629 ntTSL 2 BASIC38.04■■■■□ 3.68
CDC42BPAQ5VT25 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
CDC42BPAQ5VT25 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
CDC42BPAQ5VT25 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC38.03■■■■□ 3.68
CDC42BPAQ5VT25 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC38.03■■■■□ 3.68
CDC42BPAQ5VT25 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
CDC42BPAQ5VT25 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC38.02■■■■□ 3.68
CDC42BPAQ5VT25 AC103724.3-201ENST00000564481 992 ntBASIC38.02■■■■□ 3.68
CDC42BPAQ5VT25 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CDC42BPAQ5VT25 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CDC42BPAQ5VT25 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC38.01■■■■□ 3.68
CDC42BPAQ5VT25 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC38.01■■■■□ 3.68
CDC42BPAQ5VT25 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.67
CDC42BPAQ5VT25 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC38■■■■□ 3.67
CDC42BPAQ5VT25 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
CDC42BPAQ5VT25 AC074183.2-201ENST00000623112 922 ntBASIC38■■■■□ 3.67
CDC42BPAQ5VT25 WHAMMP3-201ENST00000611636 1609 ntBASIC38■■■■□ 3.67
CDC42BPAQ5VT25 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC37.99■■■■□ 3.67
CDC42BPAQ5VT25 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
CDC42BPAQ5VT25 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
CDC42BPAQ5VT25 HYI-210ENST00000486909 905 ntTSL 5 BASIC37.97■■■■□ 3.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms