Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CCDC144BQ3MJ40 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CCDC144BQ3MJ40 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CCDC144BQ3MJ40 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CCDC144BQ3MJ40 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.7■■■□□ 2.18
CCDC144BQ3MJ40 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.7■■■□□ 2.18
CCDC144BQ3MJ40 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CCDC144BQ3MJ40 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
CCDC144BQ3MJ40 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CCDC144BQ3MJ40 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CCDC144BQ3MJ40 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
CCDC144BQ3MJ40 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
CCDC144BQ3MJ40 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CCDC144BQ3MJ40 ECEL1P2-201ENST00000461596 1295 ntBASIC28.67■■■□□ 2.18
CCDC144BQ3MJ40 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CCDC144BQ3MJ40 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CCDC144BQ3MJ40 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
CCDC144BQ3MJ40 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
CCDC144BQ3MJ40 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.66■■■□□ 2.18
CCDC144BQ3MJ40 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CCDC144BQ3MJ40 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.66■■■□□ 2.18
CCDC144BQ3MJ40 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
CCDC144BQ3MJ40 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.65■■■□□ 2.18
CCDC144BQ3MJ40 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC144BQ3MJ40 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC144BQ3MJ40 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC144BQ3MJ40 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC144BQ3MJ40 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCDC144BQ3MJ40 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.65■■■□□ 2.18
CCDC144BQ3MJ40 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
CCDC144BQ3MJ40 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC144BQ3MJ40 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.64■■■□□ 2.18
CCDC144BQ3MJ40 KRT18P60-201ENST00000312876 1297 ntBASIC28.64■■■□□ 2.18
CCDC144BQ3MJ40 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CCDC144BQ3MJ40 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.64■■■□□ 2.17
CCDC144BQ3MJ40 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CCDC144BQ3MJ40 AC126177.7-201ENST00000547904 679 ntBASIC28.63■■■□□ 2.17
CCDC144BQ3MJ40 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCDC144BQ3MJ40 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.62■■■□□ 2.17
CCDC144BQ3MJ40 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.62■■■□□ 2.17
CCDC144BQ3MJ40 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CCDC144BQ3MJ40 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CCDC144BQ3MJ40 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.6■■■□□ 2.17
CCDC144BQ3MJ40 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
CCDC144BQ3MJ40 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
CCDC144BQ3MJ40 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CCDC144BQ3MJ40 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.59■■■□□ 2.17
CCDC144BQ3MJ40 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.59■■■□□ 2.17
CCDC144BQ3MJ40 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CCDC144BQ3MJ40 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.58■■■□□ 2.17
CCDC144BQ3MJ40 TSPY13P-201ENST00000338964 914 ntBASIC28.58■■■□□ 2.17
CCDC144BQ3MJ40 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.58■■■□□ 2.17
CCDC144BQ3MJ40 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CCDC144BQ3MJ40 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.58■■■□□ 2.17
CCDC144BQ3MJ40 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
CCDC144BQ3MJ40 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CCDC144BQ3MJ40 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CCDC144BQ3MJ40 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.57■■■□□ 2.16
CCDC144BQ3MJ40 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CCDC144BQ3MJ40 AC004987.1-201ENST00000428627 508 ntBASIC28.57■■■□□ 2.16
CCDC144BQ3MJ40 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.56■■■□□ 2.16
CCDC144BQ3MJ40 AL157400.5-201ENST00000507624 621 ntBASIC28.56■■■□□ 2.16
CCDC144BQ3MJ40 AP004833.2-201ENST00000532228 1454 ntBASIC28.55■■■□□ 2.16
CCDC144BQ3MJ40 ATP5G2P3-201ENST00000429083 425 ntBASIC28.55■■■□□ 2.16
CCDC144BQ3MJ40 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.55■■■□□ 2.16
CCDC144BQ3MJ40 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCDC144BQ3MJ40 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
CCDC144BQ3MJ40 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC144BQ3MJ40 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.54■■■□□ 2.16
CCDC144BQ3MJ40 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC144BQ3MJ40 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.54■■■□□ 2.16
CCDC144BQ3MJ40 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC144BQ3MJ40 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CCDC144BQ3MJ40 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.53■■■□□ 2.16
CCDC144BQ3MJ40 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCDC144BQ3MJ40 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.53■■■□□ 2.16
CCDC144BQ3MJ40 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCDC144BQ3MJ40 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CCDC144BQ3MJ40 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCDC144BQ3MJ40 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CCDC144BQ3MJ40 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
CCDC144BQ3MJ40 AC100797.4-201ENST00000631653 1827 ntBASIC28.52■■■□□ 2.16
CCDC144BQ3MJ40 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CCDC144BQ3MJ40 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CCDC144BQ3MJ40 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
CCDC144BQ3MJ40 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
CCDC144BQ3MJ40 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.5■■■□□ 2.15
CCDC144BQ3MJ40 BX255925.1-201ENST00000566954 1854 ntBASIC28.49■■■□□ 2.15
CCDC144BQ3MJ40 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
CCDC144BQ3MJ40 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CCDC144BQ3MJ40 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CCDC144BQ3MJ40 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.49■■■□□ 2.15
CCDC144BQ3MJ40 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CCDC144BQ3MJ40 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.49■■■□□ 2.15
CCDC144BQ3MJ40 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
CCDC144BQ3MJ40 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.48■■■□□ 2.15
CCDC144BQ3MJ40 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
CCDC144BQ3MJ40 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CCDC144BQ3MJ40 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CCDC144BQ3MJ40 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.48■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms