Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PER3P56645 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.66■■□□□ 1.22
PER3P56645 AC142086.6-201ENST00000621154 1765 ntBASIC22.66■■□□□ 1.22
PER3P56645 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PER3P56645 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PER3P56645 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PER3P56645 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PER3P56645 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PER3P56645 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PER3P56645 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PER3P56645 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.65■■□□□ 1.22
PER3P56645 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.65■■□□□ 1.22
PER3P56645 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PER3P56645 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PER3P56645 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PER3P56645 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PER3P56645 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PER3P56645 AP004833.2-201ENST00000532228 1454 ntBASIC22.63■■□□□ 1.21
PER3P56645 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PER3P56645 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.62■■□□□ 1.21
PER3P56645 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PER3P56645 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PER3P56645 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.62■■□□□ 1.21
PER3P56645 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PER3P56645 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PER3P56645 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PER3P56645 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.61■■□□□ 1.21
PER3P56645 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PER3P56645 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PER3P56645 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PER3P56645 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.6■■□□□ 1.21
PER3P56645 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.6■■□□□ 1.21
PER3P56645 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PER3P56645 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PER3P56645 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PER3P56645 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.59■■□□□ 1.21
PER3P56645 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PER3P56645 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.59■■□□□ 1.21
PER3P56645 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PER3P56645 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PER3P56645 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
PER3P56645 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PER3P56645 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.57■■□□□ 1.2
PER3P56645 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.57■■□□□ 1.2
PER3P56645 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PER3P56645 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.56■■□□□ 1.2
PER3P56645 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.56■■□□□ 1.2
PER3P56645 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PER3P56645 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.56■■□□□ 1.2
PER3P56645 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PER3P56645 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PER3P56645 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PER3P56645 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PER3P56645 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PER3P56645 AL035685.1-201ENST00000636663 812 ntBASIC22.55■■□□□ 1.2
PER3P56645 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PER3P56645 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PER3P56645 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PER3P56645 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.54■■□□□ 1.2
PER3P56645 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.54■■□□□ 1.2
PER3P56645 AC007029.1-201ENST00000604183 313 ntBASIC22.54■■□□□ 1.2
PER3P56645 AC129492.7-201ENST00000622992 756 ntBASIC22.54■■□□□ 1.2
PER3P56645 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.53■■□□□ 1.2
PER3P56645 AC100797.4-201ENST00000631653 1827 ntBASIC22.53■■□□□ 1.2
PER3P56645 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.53■■□□□ 1.2
PER3P56645 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
PER3P56645 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PER3P56645 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.53■■□□□ 1.2
PER3P56645 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PER3P56645 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PER3P56645 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PER3P56645 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PER3P56645 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PER3P56645 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PER3P56645 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PER3P56645 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PER3P56645 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.51■■□□□ 1.19
PER3P56645 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PER3P56645 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PER3P56645 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PER3P56645 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.51■■□□□ 1.19
PER3P56645 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
PER3P56645 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.51■■□□□ 1.19
PER3P56645 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.51■■□□□ 1.19
PER3P56645 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PER3P56645 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
PER3P56645 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.5■■□□□ 1.19
PER3P56645 DUX4L18-201ENST00000553347 1267 ntBASIC22.5■■□□□ 1.19
PER3P56645 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.5■■□□□ 1.19
PER3P56645 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PER3P56645 AC133552.2-201ENST00000619106 1032 ntBASIC22.5■■□□□ 1.19
PER3P56645 AL121749.1-202ENST00000609313 2153 ntBASIC22.5■■□□□ 1.19
PER3P56645 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PER3P56645 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER3P56645 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER3P56645 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PER3P56645 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
PER3P56645 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PER3P56645 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PER3P56645 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms