Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
THBS3P49746 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
THBS3P49746 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.26■□□□□ 0.83
THBS3P49746 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.26■□□□□ 0.83
THBS3P49746 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.26■□□□□ 0.83
THBS3P49746 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
THBS3P49746 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THBS3P49746 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
THBS3P49746 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
THBS3P49746 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
THBS3P49746 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
THBS3P49746 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
THBS3P49746 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.24■□□□□ 0.83
THBS3P49746 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
THBS3P49746 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THBS3P49746 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
THBS3P49746 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
THBS3P49746 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.23■□□□□ 0.83
THBS3P49746 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.23■□□□□ 0.83
THBS3P49746 DUX4L11-201ENST00000611504 1267 ntBASIC20.23■□□□□ 0.83
THBS3P49746 DUX4L12-201ENST00000614593 1267 ntBASIC20.23■□□□□ 0.83
THBS3P49746 DUX4L14-201ENST00000621227 1267 ntBASIC20.23■□□□□ 0.83
THBS3P49746 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
THBS3P49746 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
THBS3P49746 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
THBS3P49746 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.22■□□□□ 0.83
THBS3P49746 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.22■□□□□ 0.83
THBS3P49746 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.22■□□□□ 0.83
THBS3P49746 MIR3648-2-201ENST00000581792 180 ntBASIC20.22■□□□□ 0.83
THBS3P49746 MIR3648-1-201ENST00000615959 180 ntBASIC20.22■□□□□ 0.83
THBS3P49746 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
THBS3P49746 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
THBS3P49746 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
THBS3P49746 MIR639-201ENST00000384974 98 ntBASIC20.21■□□□□ 0.83
THBS3P49746 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.21■□□□□ 0.83
THBS3P49746 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.21■□□□□ 0.83
THBS3P49746 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.21■□□□□ 0.83
THBS3P49746 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.21■□□□□ 0.83
THBS3P49746 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
THBS3P49746 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
THBS3P49746 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.2■□□□□ 0.82
THBS3P49746 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
THBS3P49746 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.2■□□□□ 0.82
THBS3P49746 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
THBS3P49746 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
THBS3P49746 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.2■□□□□ 0.82
THBS3P49746 AL449106.1-201ENST00000608517 1980 ntBASIC20.19■□□□□ 0.82
THBS3P49746 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.19■□□□□ 0.82
THBS3P49746 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THBS3P49746 AC016575.1-201ENST00000607026 382 ntBASIC20.19■□□□□ 0.82
THBS3P49746 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.19■□□□□ 0.82
THBS3P49746 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
THBS3P49746 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.18■□□□□ 0.82
THBS3P49746 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.18■□□□□ 0.82
THBS3P49746 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THBS3P49746 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
THBS3P49746 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
THBS3P49746 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.18■□□□□ 0.82
THBS3P49746 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THBS3P49746 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
THBS3P49746 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THBS3P49746 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THBS3P49746 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
THBS3P49746 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.17■□□□□ 0.82
THBS3P49746 MIR4449-201ENST00000578365 66 ntBASIC20.17■□□□□ 0.82
THBS3P49746 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.17■□□□□ 0.82
THBS3P49746 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THBS3P49746 AP004609.3-201ENST00000610705 1884 ntBASIC20.17■□□□□ 0.82
THBS3P49746 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THBS3P49746 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
THBS3P49746 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
THBS3P49746 WHAMMP3-201ENST00000611636 1609 ntBASIC20.16■□□□□ 0.82
THBS3P49746 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
THBS3P49746 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.16■□□□□ 0.82
THBS3P49746 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
THBS3P49746 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THBS3P49746 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THBS3P49746 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
THBS3P49746 CR559946.2-201ENST00000623684 991 ntBASIC20.15■□□□□ 0.82
THBS3P49746 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
THBS3P49746 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
THBS3P49746 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
THBS3P49746 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.14■□□□□ 0.81
THBS3P49746 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
THBS3P49746 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
THBS3P49746 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.14■□□□□ 0.81
THBS3P49746 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
THBS3P49746 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
THBS3P49746 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
THBS3P49746 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
THBS3P49746 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
THBS3P49746 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
THBS3P49746 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
THBS3P49746 AC142472.1-201ENST00000612013 1741 ntBASIC20.12■□□□□ 0.81
THBS3P49746 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.11■□□□□ 0.81
THBS3P49746 AC091060.1-201ENST00000623524 1766 ntBASIC20.11■□□□□ 0.81
THBS3P49746 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
THBS3P49746 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
THBS3P49746 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
THBS3P49746 DUX4L13-201ENST00000554103 1267 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms