Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PTPN6P29350 DUX4L13-201ENST00000554103 1267 ntBASIC23.45■■□□□ 1.34
PTPN6P29350 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.45■■□□□ 1.34
PTPN6P29350 DUX4L15-201ENST00000611059 1267 ntBASIC23.45■■□□□ 1.34
PTPN6P29350 DUX4L23-201ENST00000615195 1269 ntBASIC23.45■■□□□ 1.34
PTPN6P29350 DUX4L24-201ENST00000617576 1269 ntBASIC23.45■■□□□ 1.34
PTPN6P29350 DUX4L22-201ENST00000618238 1269 ntBASIC23.45■■□□□ 1.34
PTPN6P29350 DUX4L20-201ENST00000619712 1269 ntBASIC23.45■■□□□ 1.34
PTPN6P29350 DUX4L21-201ENST00000622058 1269 ntBASIC23.45■■□□□ 1.34
PTPN6P29350 DUX4L10-201ENST00000622460 1267 ntBASIC23.45■■□□□ 1.34
PTPN6P29350 DUX4L25-201ENST00000624915 1269 ntBASIC23.45■■□□□ 1.34
PTPN6P29350 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.45■■□□□ 1.34
PTPN6P29350 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PTPN6P29350 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PTPN6P29350 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PTPN6P29350 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.44■■□□□ 1.34
PTPN6P29350 MIR3648-2-201ENST00000581792 180 ntBASIC23.44■■□□□ 1.34
PTPN6P29350 MIR3648-1-201ENST00000615959 180 ntBASIC23.44■■□□□ 1.34
PTPN6P29350 CR559946.2-201ENST00000623684 991 ntBASIC23.44■■□□□ 1.34
PTPN6P29350 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.44■■□□□ 1.34
PTPN6P29350 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.44■■□□□ 1.34
PTPN6P29350 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PTPN6P29350 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
PTPN6P29350 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.43■■□□□ 1.34
PTPN6P29350 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PTPN6P29350 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.43■■□□□ 1.34
PTPN6P29350 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PTPN6P29350 HLA-V-202ENST00000446817 847 ntBASIC23.43■■□□□ 1.34
PTPN6P29350 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.43■■□□□ 1.34
PTPN6P29350 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PTPN6P29350 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PTPN6P29350 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PTPN6P29350 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
PTPN6P29350 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PTPN6P29350 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.42■■□□□ 1.34
PTPN6P29350 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
PTPN6P29350 DUSP8P4-201ENST00000399538 1761 ntBASIC23.42■■□□□ 1.34
PTPN6P29350 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PTPN6P29350 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
PTPN6P29350 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PTPN6P29350 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.41■■□□□ 1.34
PTPN6P29350 AC092803.2-201ENST00000564287 1899 ntBASIC23.41■■□□□ 1.34
PTPN6P29350 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTPN6P29350 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTPN6P29350 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.4■■□□□ 1.34
PTPN6P29350 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTPN6P29350 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTPN6P29350 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.4■■□□□ 1.34
PTPN6P29350 AC016575.1-201ENST00000607026 382 ntBASIC23.4■■□□□ 1.34
PTPN6P29350 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.4■■□□□ 1.34
PTPN6P29350 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
PTPN6P29350 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PTPN6P29350 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PTPN6P29350 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PTPN6P29350 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.39■■□□□ 1.33
PTPN6P29350 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTPN6P29350 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTPN6P29350 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.38■■□□□ 1.33
PTPN6P29350 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTPN6P29350 AC020928.2-201ENST00000588717 2197 ntBASIC23.38■■□□□ 1.33
PTPN6P29350 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PTPN6P29350 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTPN6P29350 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTPN6P29350 AC142472.1-201ENST00000612013 1741 ntBASIC23.37■■□□□ 1.33
PTPN6P29350 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PTPN6P29350 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PTPN6P29350 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTPN6P29350 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.36■■□□□ 1.33
PTPN6P29350 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTPN6P29350 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PTPN6P29350 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PTPN6P29350 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTPN6P29350 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.36■■□□□ 1.33
PTPN6P29350 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
PTPN6P29350 WHAMMP3-201ENST00000611636 1609 ntBASIC23.36■■□□□ 1.33
PTPN6P29350 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PTPN6P29350 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN6P29350 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN6P29350 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN6P29350 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.35■■□□□ 1.33
PTPN6P29350 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTPN6P29350 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.34■■□□□ 1.33
PTPN6P29350 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.34■■□□□ 1.33
PTPN6P29350 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PTPN6P29350 MIR639-201ENST00000384974 98 ntBASIC23.34■■□□□ 1.33
PTPN6P29350 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.33■■□□□ 1.33
PTPN6P29350 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PTPN6P29350 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN6P29350 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN6P29350 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN6P29350 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN6P29350 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN6P29350 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN6P29350 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN6P29350 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN6P29350 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PTPN6P29350 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTPN6P29350 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PTPN6P29350 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PTPN6P29350 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms