Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.8■□□□□ 0.92
CXCL3P19876 AC127502.1-201ENST00000399971 1502 ntBASIC20.8■□□□□ 0.92
CXCL3P19876 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CXCL3P19876 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXCL3P19876 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCL3P19876 AL139125.2-201ENST00000623134 1869 ntBASIC20.79■□□□□ 0.92
CXCL3P19876 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCL3P19876 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCL3P19876 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CXCL3P19876 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXCL3P19876 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXCL3P19876 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CXCL3P19876 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCL3P19876 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXCL3P19876 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.78■□□□□ 0.92
CXCL3P19876 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CXCL3P19876 AC142381.3-201ENST00000568208 1670 ntBASIC20.77■□□□□ 0.92
CXCL3P19876 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CXCL3P19876 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
CXCL3P19876 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL3P19876 AC068473.5-201ENST00000616428 2072 ntBASIC20.76■□□□□ 0.91
CXCL3P19876 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL3P19876 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL3P19876 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL3P19876 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CXCL3P19876 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL3P19876 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CXCL3P19876 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CXCL3P19876 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCL3P19876 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCL3P19876 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CXCL3P19876 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CXCL3P19876 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.75■□□□□ 0.91
CXCL3P19876 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CXCL3P19876 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCL3P19876 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCL3P19876 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CXCL3P19876 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCL3P19876 DYNLL1-208ENST00000550178 581 ntBASIC20.74■□□□□ 0.91
CXCL3P19876 CLDN5-201ENST00000403084 2357 ntBASIC20.74■□□□□ 0.91
CXCL3P19876 LINC00543-201ENST00000567234 1845 ntBASIC20.74■□□□□ 0.91
CXCL3P19876 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCL3P19876 AC079834.2-201ENST00000609776 1949 ntBASIC20.73■□□□□ 0.91
CXCL3P19876 AC018358.1-201ENST00000631079 1402 ntBASIC20.73■□□□□ 0.91
CXCL3P19876 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCL3P19876 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCL3P19876 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CXCL3P19876 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCL3P19876 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CXCL3P19876 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCL3P19876 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCL3P19876 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CXCL3P19876 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CXCL3P19876 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CXCL3P19876 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CXCL3P19876 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL3P19876 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL3P19876 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL3P19876 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CXCL3P19876 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CXCL3P19876 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL3P19876 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
CXCL3P19876 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL3P19876 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CXCL3P19876 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CXCL3P19876 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CXCL3P19876 AC138932.3-201ENST00000567634 1902 ntBASIC20.68■□□□□ 0.9
CXCL3P19876 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL3P19876 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL3P19876 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CXCL3P19876 AP004609.3-201ENST00000610705 1884 ntBASIC20.68■□□□□ 0.9
CXCL3P19876 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL3P19876 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL3P19876 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.67■□□□□ 0.9
CXCL3P19876 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL3P19876 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CXCL3P19876 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL3P19876 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL3P19876 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.66■□□□□ 0.9
CXCL3P19876 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CXCL3P19876 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL3P19876 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL3P19876 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL3P19876 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL3P19876 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL3P19876 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CXCL3P19876 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CXCL3P19876 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.64■□□□□ 0.89
CXCL3P19876 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL3P19876 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.64■□□□□ 0.89
CXCL3P19876 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.63■□□□□ 0.89
CXCL3P19876 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL3P19876 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL3P19876 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL3P19876 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CXCL3P19876 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.63■□□□□ 0.89
CXCL3P19876 AC022211.4-201ENST00000625094 2161 ntBASIC20.62■□□□□ 0.89
CXCL3P19876 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.62■□□□□ 0.89
CXCL3P19876 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CXCL3P19876 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms