Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CD48P09326 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.71■■□□□ 1.71
CD48P09326 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CD48P09326 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CD48P09326 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.7■■□□□ 1.71
CD48P09326 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.7■■□□□ 1.7
CD48P09326 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.7■■□□□ 1.7
CD48P09326 AC016575.1-201ENST00000607026 382 ntBASIC25.7■■□□□ 1.7
CD48P09326 AC148477.6-201ENST00000623746 465 ntBASIC25.7■■□□□ 1.7
CD48P09326 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CD48P09326 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CD48P09326 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CD48P09326 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CD48P09326 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.68■■□□□ 1.7
CD48P09326 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CD48P09326 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CD48P09326 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.68■■□□□ 1.7
CD48P09326 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.68■■□□□ 1.7
CD48P09326 MIR7108-201ENST00000614319 87 ntBASIC25.68■■□□□ 1.7
CD48P09326 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.68■■□□□ 1.7
CD48P09326 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.68■■□□□ 1.7
CD48P09326 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.68■■□□□ 1.7
CD48P09326 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CD48P09326 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.67■■□□□ 1.7
CD48P09326 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CD48P09326 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CD48P09326 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CD48P09326 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.67■■□□□ 1.7
CD48P09326 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CD48P09326 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CD48P09326 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CD48P09326 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
CD48P09326 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
CD48P09326 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.65■■□□□ 1.7
CD48P09326 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CD48P09326 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CD48P09326 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.65■■□□□ 1.7
CD48P09326 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CD48P09326 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CD48P09326 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.64■■□□□ 1.7
CD48P09326 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.64■■□□□ 1.69
CD48P09326 AC142472.1-201ENST00000612013 1741 ntBASIC25.63■■□□□ 1.69
CD48P09326 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CD48P09326 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CD48P09326 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CD48P09326 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CD48P09326 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CD48P09326 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CD48P09326 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CD48P09326 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CD48P09326 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.61■■□□□ 1.69
CD48P09326 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.61■■□□□ 1.69
CD48P09326 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CD48P09326 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CD48P09326 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CD48P09326 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.6■■□□□ 1.69
CD48P09326 AC091060.1-201ENST00000623524 1766 ntBASIC25.6■■□□□ 1.69
CD48P09326 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CD48P09326 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CD48P09326 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CD48P09326 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.6■■□□□ 1.69
CD48P09326 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CD48P09326 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CD48P09326 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.59■■□□□ 1.69
CD48P09326 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.59■■□□□ 1.69
CD48P09326 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.58■■□□□ 1.69
CD48P09326 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CD48P09326 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.58■■□□□ 1.69
CD48P09326 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CD48P09326 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.58■■□□□ 1.69
CD48P09326 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CD48P09326 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CD48P09326 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CD48P09326 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CD48P09326 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
CD48P09326 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CD48P09326 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CD48P09326 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CD48P09326 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
CD48P09326 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.56■■□□□ 1.68
CD48P09326 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.56■■□□□ 1.68
CD48P09326 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CD48P09326 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CD48P09326 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CD48P09326 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CD48P09326 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CD48P09326 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CD48P09326 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CD48P09326 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CD48P09326 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.54■■□□□ 1.68
CD48P09326 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.54■■□□□ 1.68
CD48P09326 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CD48P09326 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CD48P09326 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.53■■□□□ 1.68
CD48P09326 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.53■■□□□ 1.68
CD48P09326 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
CD48P09326 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.53■■□□□ 1.68
CD48P09326 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.53■■□□□ 1.68
CD48P09326 AL359258.2-201ENST00000564063 1566 ntBASIC25.52■■□□□ 1.68
CD48P09326 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms