Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.89■□□□□ 0.94
RAB3DO95716 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.89■□□□□ 0.93
RAB3DO95716 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB3DO95716 SETD8P1-201ENST00000623146 1180 ntBASIC20.88■□□□□ 0.93
RAB3DO95716 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB3DO95716 ERN1-208ENST00000606895 2068 ntBASIC20.88■□□□□ 0.93
RAB3DO95716 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB3DO95716 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB3DO95716 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.87■□□□□ 0.93
RAB3DO95716 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB3DO95716 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3DO95716 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3DO95716 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RAB3DO95716 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB3DO95716 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3DO95716 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB3DO95716 WHAMMP2-203ENST00000563942 1603 ntBASIC20.86■□□□□ 0.93
RAB3DO95716 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB3DO95716 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3DO95716 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3DO95716 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB3DO95716 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3DO95716 RARRES2P7-201ENST00000567349 469 ntBASIC20.84■□□□□ 0.93
RAB3DO95716 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3DO95716 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RAB3DO95716 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB3DO95716 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
RAB3DO95716 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB3DO95716 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB3DO95716 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.83■□□□□ 0.93
RAB3DO95716 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.83■□□□□ 0.92
RAB3DO95716 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.83■□□□□ 0.92
RAB3DO95716 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3DO95716 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3DO95716 AL391121.1-201ENST00000607967 1349 ntBASIC20.82■□□□□ 0.92
RAB3DO95716 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3DO95716 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3DO95716 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB3DO95716 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB3DO95716 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB3DO95716 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3DO95716 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RAB3DO95716 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3DO95716 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3DO95716 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB3DO95716 AC142472.1-201ENST00000612013 1741 ntBASIC20.8■□□□□ 0.92
RAB3DO95716 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3DO95716 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3DO95716 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB3DO95716 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB3DO95716 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
RAB3DO95716 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB3DO95716 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB3DO95716 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.78■□□□□ 0.92
RAB3DO95716 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3DO95716 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAB3DO95716 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3DO95716 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3DO95716 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3DO95716 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.78■□□□□ 0.92
RAB3DO95716 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3DO95716 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3DO95716 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3DO95716 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3DO95716 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3DO95716 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3DO95716 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3DO95716 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3DO95716 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB3DO95716 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB3DO95716 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3DO95716 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3DO95716 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3DO95716 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3DO95716 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3DO95716 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RAB3DO95716 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3DO95716 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3DO95716 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3DO95716 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.76■□□□□ 0.91
RAB3DO95716 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3DO95716 AC142381.3-201ENST00000568208 1670 ntBASIC20.76■□□□□ 0.91
RAB3DO95716 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3DO95716 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3DO95716 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3DO95716 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3DO95716 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB3DO95716 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3DO95716 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3DO95716 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3DO95716 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3DO95716 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3DO95716 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3DO95716 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3DO95716 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAB3DO95716 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB3DO95716 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3DO95716 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3DO95716 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3DO95716 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms