Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC39.55■■■■□ 3.92
ABCA8O94911 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC39.55■■■■□ 3.92
ABCA8O94911 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC39.54■■■■□ 3.92
ABCA8O94911 ST7-AS1-201ENST00000456775 1889 ntBASIC39.54■■■■□ 3.92
ABCA8O94911 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC39.54■■■■□ 3.92
ABCA8O94911 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
ABCA8O94911 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC39.54■■■■□ 3.92
ABCA8O94911 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC39.54■■■■□ 3.92
ABCA8O94911 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
ABCA8O94911 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
ABCA8O94911 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC39.53■■■■□ 3.92
ABCA8O94911 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
ABCA8O94911 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC39.52■■■■□ 3.92
ABCA8O94911 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
ABCA8O94911 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC39.52■■■■□ 3.92
ABCA8O94911 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC39.51■■■■□ 3.92
ABCA8O94911 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC39.51■■■■□ 3.92
ABCA8O94911 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
ABCA8O94911 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC39.51■■■■□ 3.92
ABCA8O94911 OR2A1-AS1-204ENST00000470435 602 ntBASIC39.5■■■■□ 3.91
ABCA8O94911 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
ABCA8O94911 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
ABCA8O94911 MTURN-203ENST00000409688 843 ntTSL 2 BASIC39.5■■■■□ 3.91
ABCA8O94911 AC139795.1-202ENST00000500444 432 ntBASIC39.5■■■■□ 3.91
ABCA8O94911 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
ABCA8O94911 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC39.49■■■■□ 3.91
ABCA8O94911 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC39.49■■■■□ 3.91
ABCA8O94911 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
ABCA8O94911 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC39.49■■■■□ 3.91
ABCA8O94911 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
ABCA8O94911 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC39.48■■■■□ 3.91
ABCA8O94911 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC39.48■■■■□ 3.91
ABCA8O94911 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
ABCA8O94911 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC39.47■■■■□ 3.91
ABCA8O94911 BHLHE23-202ENST00000612929 1109 ntBASIC39.47■■■■□ 3.91
ABCA8O94911 AC131212.1-201ENST00000613771 668 ntBASIC39.47■■■■□ 3.91
ABCA8O94911 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
ABCA8O94911 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC39.47■■■■□ 3.91
ABCA8O94911 AC103724.3-201ENST00000564481 992 ntBASIC39.46■■■■□ 3.91
ABCA8O94911 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
ABCA8O94911 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
ABCA8O94911 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
ABCA8O94911 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC39.45■■■■□ 3.91
ABCA8O94911 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC39.45■■■■□ 3.91
ABCA8O94911 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC39.45■■■■□ 3.91
ABCA8O94911 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC39.45■■■■□ 3.91
ABCA8O94911 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC39.44■■■■□ 3.9
ABCA8O94911 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC39.44■■■■□ 3.9
ABCA8O94911 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC39.42■■■■□ 3.9
ABCA8O94911 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC39.42■■■■□ 3.9
ABCA8O94911 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
ABCA8O94911 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC39.42■■■■□ 3.9
ABCA8O94911 IDNK-203ENST00000405990 629 ntTSL 2 BASIC39.42■■■■□ 3.9
ABCA8O94911 YBX1P4-201ENST00000392794 808 ntBASIC39.41■■■■□ 3.9
ABCA8O94911 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC39.41■■■■□ 3.9
ABCA8O94911 THA1P-201ENST00000590384 1145 ntBASIC39.41■■■■□ 3.9
ABCA8O94911 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC39.41■■■■□ 3.9
ABCA8O94911 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
ABCA8O94911 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
ABCA8O94911 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
ABCA8O94911 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC39.4■■■■□ 3.9
ABCA8O94911 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC39.39■■■■□ 3.9
ABCA8O94911 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC39.38■■■■□ 3.9
ABCA8O94911 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC39.38■■■■□ 3.89
ABCA8O94911 IDNK-201ENST00000376417 511 ntTSL 5 BASIC39.38■■■■□ 3.89
ABCA8O94911 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
ABCA8O94911 PRTG-204ENST00000561292 833 ntTSL 3 BASIC39.38■■■■□ 3.89
ABCA8O94911 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC39.37■■■■□ 3.89
ABCA8O94911 HYI-210ENST00000486909 905 ntTSL 5 BASIC39.37■■■■□ 3.89
ABCA8O94911 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC39.37■■■■□ 3.89
ABCA8O94911 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC39.36■■■■□ 3.89
ABCA8O94911 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC39.34■■■■□ 3.89
ABCA8O94911 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC39.33■■■■□ 3.89
ABCA8O94911 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
ABCA8O94911 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
ABCA8O94911 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC39.32■■■■□ 3.88
ABCA8O94911 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC39.32■■■■□ 3.88
ABCA8O94911 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC39.31■■■■□ 3.88
ABCA8O94911 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC39.31■■■■□ 3.88
ABCA8O94911 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC39.31■■■■□ 3.88
ABCA8O94911 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC39.31■■■■□ 3.88
ABCA8O94911 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC39.3■■■■□ 3.88
ABCA8O94911 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC39.3■■■■□ 3.88
ABCA8O94911 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC39.29■■■■□ 3.88
ABCA8O94911 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC39.29■■■■□ 3.88
ABCA8O94911 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
ABCA8O94911 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
ABCA8O94911 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
ABCA8O94911 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
ABCA8O94911 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC39.28■■■■□ 3.88
ABCA8O94911 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC39.28■■■■□ 3.88
ABCA8O94911 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
ABCA8O94911 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC39.27■■■■□ 3.88
ABCA8O94911 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
ABCA8O94911 AL356441.2-201ENST00000443009 864 ntBASIC39.27■■■■□ 3.88
ABCA8O94911 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC39.26■■■■□ 3.88
ABCA8O94911 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC39.25■■■■□ 3.87
ABCA8O94911 AL031848.2-201ENST00000607670 837 ntBASIC39.25■■■■□ 3.87
ABCA8O94911 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC39.25■■■■□ 3.87
ABCA8O94911 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC39.24■■■■□ 3.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms