Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
GMDSO60547 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GMDSO60547 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GMDSO60547 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.68■■□□□ 1.06
GMDSO60547 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.68■■□□□ 1.06
GMDSO60547 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GMDSO60547 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GMDSO60547 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GMDSO60547 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GMDSO60547 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GMDSO60547 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GMDSO60547 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.67■■□□□ 1.06
GMDSO60547 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.67■■□□□ 1.06
GMDSO60547 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
GMDSO60547 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
GMDSO60547 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
GMDSO60547 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GMDSO60547 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
GMDSO60547 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GMDSO60547 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GMDSO60547 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GMDSO60547 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
GMDSO60547 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.63■■□□□ 1.05
GMDSO60547 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.63■■□□□ 1.05
GMDSO60547 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.63■■□□□ 1.05
GMDSO60547 DUX4L11-201ENST00000611504 1267 ntBASIC21.63■■□□□ 1.05
GMDSO60547 DUX4L12-201ENST00000614593 1267 ntBASIC21.63■■□□□ 1.05
GMDSO60547 DUX4L14-201ENST00000621227 1267 ntBASIC21.63■■□□□ 1.05
GMDSO60547 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.63■■□□□ 1.05
GMDSO60547 AC110285.7-201ENST00000624417 1536 ntBASIC21.63■■□□□ 1.05
GMDSO60547 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.63■■□□□ 1.05
GMDSO60547 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
GMDSO60547 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GMDSO60547 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GMDSO60547 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GMDSO60547 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GMDSO60547 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.62■■□□□ 1.05
GMDSO60547 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GMDSO60547 DUX4L13-201ENST00000554103 1267 ntBASIC21.62■■□□□ 1.05
GMDSO60547 DUX4L15-201ENST00000611059 1267 ntBASIC21.62■■□□□ 1.05
GMDSO60547 DUX4L23-201ENST00000615195 1269 ntBASIC21.62■■□□□ 1.05
GMDSO60547 DUX4L24-201ENST00000617576 1269 ntBASIC21.62■■□□□ 1.05
GMDSO60547 DUX4L22-201ENST00000618238 1269 ntBASIC21.62■■□□□ 1.05
GMDSO60547 DUX4L20-201ENST00000619712 1269 ntBASIC21.62■■□□□ 1.05
GMDSO60547 DUX4L21-201ENST00000622058 1269 ntBASIC21.62■■□□□ 1.05
GMDSO60547 DUX4L10-201ENST00000622460 1267 ntBASIC21.62■■□□□ 1.05
GMDSO60547 DUX4L25-201ENST00000624915 1269 ntBASIC21.62■■□□□ 1.05
GMDSO60547 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
GMDSO60547 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
GMDSO60547 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
GMDSO60547 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GMDSO60547 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.61■■□□□ 1.05
GMDSO60547 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.61■■□□□ 1.05
GMDSO60547 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
GMDSO60547 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
GMDSO60547 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
GMDSO60547 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
GMDSO60547 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
GMDSO60547 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GMDSO60547 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GMDSO60547 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GMDSO60547 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.58■■□□□ 1.05
GMDSO60547 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
GMDSO60547 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GMDSO60547 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GMDSO60547 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
GMDSO60547 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GMDSO60547 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GMDSO60547 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GMDSO60547 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GMDSO60547 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GMDSO60547 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GMDSO60547 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
GMDSO60547 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
GMDSO60547 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.56■■□□□ 1.04
GMDSO60547 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GMDSO60547 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GMDSO60547 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GMDSO60547 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.56■■□□□ 1.04
GMDSO60547 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
GMDSO60547 AC093323.1-202ENST00000635031 2045 ntBASIC21.56■■□□□ 1.04
GMDSO60547 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
GMDSO60547 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
GMDSO60547 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GMDSO60547 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GMDSO60547 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GMDSO60547 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GMDSO60547 AC145676.1-201ENST00000514988 2004 ntBASIC21.55■■□□□ 1.04
GMDSO60547 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.55■■□□□ 1.04
GMDSO60547 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GMDSO60547 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GMDSO60547 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.55■■□□□ 1.04
GMDSO60547 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GMDSO60547 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.54■■□□□ 1.04
GMDSO60547 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.53■■□□□ 1.04
GMDSO60547 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.53■■□□□ 1.04
GMDSO60547 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.53■■□□□ 1.04
GMDSO60547 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GMDSO60547 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GMDSO60547 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms