Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.43■■□□□ 1.18
IDH3BO43837 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
IDH3BO43837 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
IDH3BO43837 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
IDH3BO43837 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
IDH3BO43837 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.42■■□□□ 1.18
IDH3BO43837 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
IDH3BO43837 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
IDH3BO43837 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
IDH3BO43837 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.41■■□□□ 1.18
IDH3BO43837 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
IDH3BO43837 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
IDH3BO43837 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
IDH3BO43837 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
IDH3BO43837 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
IDH3BO43837 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
IDH3BO43837 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
IDH3BO43837 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
IDH3BO43837 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
IDH3BO43837 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.4■■□□□ 1.18
IDH3BO43837 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
IDH3BO43837 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.4■■□□□ 1.18
IDH3BO43837 AC110285.7-201ENST00000624417 1536 ntBASIC22.4■■□□□ 1.18
IDH3BO43837 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
IDH3BO43837 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.39■■□□□ 1.18
IDH3BO43837 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
IDH3BO43837 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
IDH3BO43837 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
IDH3BO43837 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.39■■□□□ 1.17
IDH3BO43837 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
IDH3BO43837 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
IDH3BO43837 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
IDH3BO43837 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
IDH3BO43837 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
IDH3BO43837 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
IDH3BO43837 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
IDH3BO43837 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
IDH3BO43837 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
IDH3BO43837 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
IDH3BO43837 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
IDH3BO43837 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.38■■□□□ 1.17
IDH3BO43837 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
IDH3BO43837 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
IDH3BO43837 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.37■■□□□ 1.17
IDH3BO43837 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
IDH3BO43837 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.37■■□□□ 1.17
IDH3BO43837 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
IDH3BO43837 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.36■■□□□ 1.17
IDH3BO43837 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
IDH3BO43837 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.36■■□□□ 1.17
IDH3BO43837 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
IDH3BO43837 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.35■■□□□ 1.17
IDH3BO43837 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
IDH3BO43837 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.35■■□□□ 1.17
IDH3BO43837 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
IDH3BO43837 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
IDH3BO43837 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
IDH3BO43837 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.34■■□□□ 1.17
IDH3BO43837 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
IDH3BO43837 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
IDH3BO43837 AC093323.1-202ENST00000635031 2045 ntBASIC22.34■■□□□ 1.17
IDH3BO43837 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
IDH3BO43837 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
IDH3BO43837 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
IDH3BO43837 AC091060.1-201ENST00000623524 1766 ntBASIC22.33■■□□□ 1.16
IDH3BO43837 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
IDH3BO43837 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
IDH3BO43837 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.32■■□□□ 1.16
IDH3BO43837 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
IDH3BO43837 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.31■■□□□ 1.16
IDH3BO43837 DUX4L29-201ENST00000425409 679 ntBASIC22.31■■□□□ 1.16
IDH3BO43837 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
IDH3BO43837 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.31■■□□□ 1.16
IDH3BO43837 AC021231.2-201ENST00000594613 730 ntBASIC22.31■■□□□ 1.16
IDH3BO43837 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.31■■□□□ 1.16
IDH3BO43837 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.3■■□□□ 1.16
IDH3BO43837 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
IDH3BO43837 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.3■■□□□ 1.16
IDH3BO43837 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.29■■□□□ 1.16
IDH3BO43837 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
IDH3BO43837 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
IDH3BO43837 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
IDH3BO43837 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
IDH3BO43837 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.28■■□□□ 1.16
IDH3BO43837 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.28■■□□□ 1.16
IDH3BO43837 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IDH3BO43837 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
IDH3BO43837 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.27■■□□□ 1.16
IDH3BO43837 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.27■■□□□ 1.16
IDH3BO43837 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
IDH3BO43837 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
IDH3BO43837 AP004609.3-201ENST00000610705 1884 ntBASIC22.27■■□□□ 1.16
IDH3BO43837 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
IDH3BO43837 AC145676.1-201ENST00000514988 2004 ntBASIC22.26■■□□□ 1.15
IDH3BO43837 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.26■■□□□ 1.15
IDH3BO43837 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.26■■□□□ 1.15
IDH3BO43837 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.25■■□□□ 1.15
IDH3BO43837 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IDH3BO43837 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IDH3BO43837 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms