Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PAX4O43316 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.5■□□□□ 0.39
PAX4O43316 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.5■□□□□ 0.39
PAX4O43316 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAX4O43316 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAX4O43316 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAX4O43316 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PAX4O43316 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAX4O43316 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.49■□□□□ 0.39
PAX4O43316 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.49■□□□□ 0.39
PAX4O43316 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAX4O43316 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.49■□□□□ 0.39
PAX4O43316 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAX4O43316 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PAX4O43316 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.49■□□□□ 0.39
PAX4O43316 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PAX4O43316 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PAX4O43316 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PAX4O43316 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PAX4O43316 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PAX4O43316 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.48■□□□□ 0.39
PAX4O43316 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAX4O43316 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PAX4O43316 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.47■□□□□ 0.39
PAX4O43316 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.47■□□□□ 0.39
PAX4O43316 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAX4O43316 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAX4O43316 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAX4O43316 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAX4O43316 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.46■□□□□ 0.39
PAX4O43316 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PAX4O43316 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PAX4O43316 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PAX4O43316 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAX4O43316 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.46■□□□□ 0.39
PAX4O43316 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PAX4O43316 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAX4O43316 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.46■□□□□ 0.39
PAX4O43316 WHAMMP3-201ENST00000611636 1609 ntBASIC17.46■□□□□ 0.39
PAX4O43316 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.46■□□□□ 0.39
PAX4O43316 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAX4O43316 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PAX4O43316 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PAX4O43316 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAX4O43316 AC126177.7-201ENST00000547904 679 ntBASIC17.45■□□□□ 0.38
PAX4O43316 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PAX4O43316 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PAX4O43316 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PAX4O43316 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PAX4O43316 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PAX4O43316 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX4O43316 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PAX4O43316 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PAX4O43316 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAX4O43316 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAX4O43316 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAX4O43316 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.43■□□□□ 0.38
PAX4O43316 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
PAX4O43316 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.43■□□□□ 0.38
PAX4O43316 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.43■□□□□ 0.38
PAX4O43316 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAX4O43316 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAX4O43316 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PAX4O43316 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAX4O43316 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAX4O43316 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAX4O43316 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.42■□□□□ 0.38
PAX4O43316 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PAX4O43316 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAX4O43316 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAX4O43316 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.41■□□□□ 0.38
PAX4O43316 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
PAX4O43316 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAX4O43316 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PAX4O43316 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PAX4O43316 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PAX4O43316 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PAX4O43316 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PAX4O43316 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PAX4O43316 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAX4O43316 AL359258.2-201ENST00000564063 1566 ntBASIC17.4■□□□□ 0.38
PAX4O43316 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAX4O43316 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PAX4O43316 AL449106.1-201ENST00000608517 1980 ntBASIC17.39■□□□□ 0.37
PAX4O43316 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PAX4O43316 MIR4449-201ENST00000578365 66 ntBASIC17.39■□□□□ 0.37
PAX4O43316 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.39■□□□□ 0.37
PAX4O43316 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PAX4O43316 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PAX4O43316 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms