Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.79■□□□□ 0.28
NDUFA1O15239 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFA1O15239 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFA1O15239 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.79■□□□□ 0.28
NDUFA1O15239 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.78■□□□□ 0.28
NDUFA1O15239 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFA1O15239 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.78■□□□□ 0.28
NDUFA1O15239 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFA1O15239 AC108673.1-201ENST00000510422 1159 ntBASIC16.78■□□□□ 0.28
NDUFA1O15239 SUZ12P1-203ENST00000578195 985 ntBASIC16.78■□□□□ 0.28
NDUFA1O15239 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFA1O15239 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFA1O15239 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFA1O15239 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.77■□□□□ 0.28
NDUFA1O15239 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.77■□□□□ 0.28
NDUFA1O15239 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.77■□□□□ 0.28
NDUFA1O15239 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NDUFA1O15239 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NDUFA1O15239 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NDUFA1O15239 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NDUFA1O15239 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NDUFA1O15239 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NDUFA1O15239 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.76■□□□□ 0.27
NDUFA1O15239 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NDUFA1O15239 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NDUFA1O15239 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NDUFA1O15239 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.75■□□□□ 0.27
NDUFA1O15239 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.75■□□□□ 0.27
NDUFA1O15239 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.75■□□□□ 0.27
NDUFA1O15239 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.75■□□□□ 0.27
NDUFA1O15239 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.75■□□□□ 0.27
NDUFA1O15239 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA1O15239 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.74■□□□□ 0.27
NDUFA1O15239 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA1O15239 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.74■□□□□ 0.27
NDUFA1O15239 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA1O15239 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA1O15239 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NDUFA1O15239 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA1O15239 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA1O15239 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA1O15239 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA1O15239 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA1O15239 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA1O15239 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA1O15239 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.72■□□□□ 0.27
NDUFA1O15239 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFA1O15239 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.72■□□□□ 0.27
NDUFA1O15239 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA1O15239 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
NDUFA1O15239 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFA1O15239 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NDUFA1O15239 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFA1O15239 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFA1O15239 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFA1O15239 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NDUFA1O15239 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFA1O15239 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
NDUFA1O15239 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFA1O15239 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 ERN1-208ENST00000606895 2068 ntBASIC16.69■□□□□ 0.26
NDUFA1O15239 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFA1O15239 MIR3665-201ENST00000578708 105 ntBASIC16.69■□□□□ 0.26
NDUFA1O15239 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NDUFA1O15239 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFA1O15239 AC135983.2-203ENST00000454486 1613 ntBASIC16.69■□□□□ 0.26
NDUFA1O15239 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFA1O15239 AP004609.3-201ENST00000610705 1884 ntBASIC16.69■□□□□ 0.26
NDUFA1O15239 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDUFA1O15239 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDUFA1O15239 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDUFA1O15239 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
NDUFA1O15239 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDUFA1O15239 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDUFA1O15239 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA1O15239 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA1O15239 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NDUFA1O15239 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
NDUFA1O15239 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.67■□□□□ 0.26
NDUFA1O15239 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms