Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.79■□□□□ 0.28
NDUFA1O15239 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFA1O15239 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFA1O15239 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC16.79■□□□□ 0.28
NDUFA1O15239 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.78■□□□□ 0.28
NDUFA1O15239 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFA1O15239 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.78■□□□□ 0.28
NDUFA1O15239 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFA1O15239 AC108673.1-201ENST00000510422 1159 ntBASIC16.78■□□□□ 0.28
NDUFA1O15239 SUZ12P1-203ENST00000578195 985 ntBASIC16.78■□□□□ 0.28
NDUFA1O15239 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFA1O15239 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFA1O15239 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NDUFA1O15239 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.77■□□□□ 0.28
NDUFA1O15239 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.77■□□□□ 0.28
NDUFA1O15239 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.77■□□□□ 0.28
NDUFA1O15239 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NDUFA1O15239 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NDUFA1O15239 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NDUFA1O15239 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NDUFA1O15239 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NDUFA1O15239 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NDUFA1O15239 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NDUFA1O15239 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.76■□□□□ 0.27
NDUFA1O15239 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NDUFA1O15239 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NDUFA1O15239 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NDUFA1O15239 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.75■□□□□ 0.27
NDUFA1O15239 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.75■□□□□ 0.27
NDUFA1O15239 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.75■□□□□ 0.27
NDUFA1O15239 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.75■□□□□ 0.27
NDUFA1O15239 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.75■□□□□ 0.27
NDUFA1O15239 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA1O15239 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.74■□□□□ 0.27
NDUFA1O15239 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA1O15239 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC16.74■□□□□ 0.27
NDUFA1O15239 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA1O15239 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA1O15239 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NDUFA1O15239 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NDUFA1O15239 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA1O15239 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA1O15239 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NDUFA1O15239 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA1O15239 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA1O15239 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA1O15239 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.72■□□□□ 0.27
NDUFA1O15239 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFA1O15239 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.72■□□□□ 0.27
NDUFA1O15239 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFA1O15239 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
NDUFA1O15239 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFA1O15239 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NDUFA1O15239 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFA1O15239 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFA1O15239 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFA1O15239 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFA1O15239 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NDUFA1O15239 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFA1O15239 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
NDUFA1O15239 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFA1O15239 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFA1O15239 ERN1-208ENST00000606895 2068 ntBASIC16.69■□□□□ 0.26
NDUFA1O15239 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFA1O15239 MIR3665-201ENST00000578708 105 ntBASIC16.69■□□□□ 0.26
NDUFA1O15239 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NDUFA1O15239 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFA1O15239 AC135983.2-203ENST00000454486 1613 ntBASIC16.69■□□□□ 0.26
NDUFA1O15239 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFA1O15239 AP004609.3-201ENST00000610705 1884 ntBASIC16.69■□□□□ 0.26
NDUFA1O15239 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDUFA1O15239 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDUFA1O15239 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDUFA1O15239 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
NDUFA1O15239 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDUFA1O15239 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDUFA1O15239 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA1O15239 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDUFA1O15239 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NDUFA1O15239 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
NDUFA1O15239 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.67■□□□□ 0.26
NDUFA1O15239 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms