Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
HFM1A2PYH4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC37.14■■■■□ 3.54
HFM1A2PYH4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC37.14■■■■□ 3.54
HFM1A2PYH4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.54
HFM1A2PYH4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC37.13■■■■□ 3.53
HFM1A2PYH4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.53
HFM1A2PYH4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC37.13■■■■□ 3.53
HFM1A2PYH4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC37.13■■■■□ 3.53
HFM1A2PYH4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC37.13■■■■□ 3.53
HFM1A2PYH4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
HFM1A2PYH4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC37.11■■■■□ 3.53
HFM1A2PYH4 AC007029.1-201ENST00000604183 313 ntBASIC37.11■■■■□ 3.53
HFM1A2PYH4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC37.11■■■■□ 3.53
HFM1A2PYH4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
HFM1A2PYH4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC37.09■■■■□ 3.53
HFM1A2PYH4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC37.09■■■■□ 3.53
HFM1A2PYH4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC37.09■■■■□ 3.53
HFM1A2PYH4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC37.09■■■■□ 3.53
HFM1A2PYH4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
HFM1A2PYH4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC37.08■■■■□ 3.53
HFM1A2PYH4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC37.08■■■■□ 3.53
HFM1A2PYH4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC37.07■■■■□ 3.52
HFM1A2PYH4 AL449106.1-201ENST00000608517 1980 ntBASIC37.07■■■■□ 3.52
HFM1A2PYH4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC37.07■■■■□ 3.52
HFM1A2PYH4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC37.06■■■■□ 3.52
HFM1A2PYH4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
HFM1A2PYH4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC37.06■■■■□ 3.52
HFM1A2PYH4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
HFM1A2PYH4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC37.05■■■■□ 3.52
HFM1A2PYH4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC37.05■■■■□ 3.52
HFM1A2PYH4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
HFM1A2PYH4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC37.04■■■■□ 3.52
HFM1A2PYH4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC37.04■■■■□ 3.52
HFM1A2PYH4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC37.04■■■■□ 3.52
HFM1A2PYH4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC37.03■■■■□ 3.52
HFM1A2PYH4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC37.03■■■■□ 3.52
HFM1A2PYH4 REST-210ENST00000638187 1334 ntTSL 5 BASIC37.03■■■■□ 3.52
HFM1A2PYH4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
HFM1A2PYH4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC37.02■■■■□ 3.52
HFM1A2PYH4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
HFM1A2PYH4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC37.02■■■■□ 3.52
HFM1A2PYH4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
HFM1A2PYH4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
HFM1A2PYH4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
HFM1A2PYH4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
HFM1A2PYH4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
HFM1A2PYH4 NTF6A-201ENST00000591175 560 ntBASIC37.01■■■■□ 3.51
HFM1A2PYH4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
HFM1A2PYH4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC37■■■■□ 3.51
HFM1A2PYH4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC36.99■■■■□ 3.51
HFM1A2PYH4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC36.99■■■■□ 3.51
HFM1A2PYH4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC36.99■■■■□ 3.51
HFM1A2PYH4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC36.99■■■■□ 3.51
HFM1A2PYH4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC36.99■■■■□ 3.51
HFM1A2PYH4 U85056.1-201ENST00000616429 682 ntBASIC36.99■■■■□ 3.51
HFM1A2PYH4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC36.99■■■■□ 3.51
HFM1A2PYH4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC36.98■■■■□ 3.51
HFM1A2PYH4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
HFM1A2PYH4 AL359504.2-201ENST00000605506 1601 ntBASIC36.98■■■■□ 3.51
HFM1A2PYH4 SMPD5-203ENST00000639008 1464 ntBASIC36.97■■■■□ 3.51
HFM1A2PYH4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC36.97■■■■□ 3.51
HFM1A2PYH4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC36.97■■■■□ 3.51
HFM1A2PYH4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.5
HFM1A2PYH4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
HFM1A2PYH4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC36.93■■■■□ 3.5
HFM1A2PYH4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC36.93■■■■□ 3.5
HFM1A2PYH4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC36.92■■■■□ 3.5
HFM1A2PYH4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
HFM1A2PYH4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC36.92■■■■□ 3.5
HFM1A2PYH4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
HFM1A2PYH4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC36.91■■■■□ 3.5
HFM1A2PYH4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC36.9■■■■□ 3.5
HFM1A2PYH4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
HFM1A2PYH4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC36.9■■■■□ 3.5
HFM1A2PYH4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC36.9■■■■□ 3.5
HFM1A2PYH4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
HFM1A2PYH4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC36.89■■■■□ 3.5
HFM1A2PYH4 GFER-205ENST00000569451 517 ntTSL 5 BASIC36.89■■■■□ 3.5
HFM1A2PYH4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC36.88■■■■□ 3.49
HFM1A2PYH4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC36.88■■■■□ 3.49
HFM1A2PYH4 AC009831.1-201ENST00000580420 1582 ntBASIC36.88■■■■□ 3.49
HFM1A2PYH4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC36.87■■■■□ 3.49
HFM1A2PYH4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC36.87■■■■□ 3.49
HFM1A2PYH4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC36.86■■■■□ 3.49
HFM1A2PYH4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
HFM1A2PYH4 RAP2CP1-202ENST00000605179 643 ntBASIC36.86■■■■□ 3.49
HFM1A2PYH4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC36.86■■■■□ 3.49
HFM1A2PYH4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC36.86■■■■□ 3.49
HFM1A2PYH4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
HFM1A2PYH4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC36.86■■■■□ 3.49
HFM1A2PYH4 KRT18P60-201ENST00000312876 1297 ntBASIC36.85■■■■□ 3.49
HFM1A2PYH4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
HFM1A2PYH4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC36.85■■■■□ 3.49
HFM1A2PYH4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC36.85■■■■□ 3.49
HFM1A2PYH4 RP9P-202ENST00000450133 1212 ntBASIC36.85■■■■□ 3.49
HFM1A2PYH4 MIR3960-201ENST00000583311 91 ntBASIC36.85■■■■□ 3.49
HFM1A2PYH4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC36.85■■■■□ 3.49
HFM1A2PYH4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
HFM1A2PYH4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
HFM1A2PYH4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC36.84■■■■□ 3.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms