Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV3S1A0A5B6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV3S1A0A5B6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TCRBV3S1A0A5B6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TCRBV3S1A0A5B6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV3S1A0A5B6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TCRBV3S1A0A5B6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
TCRBV3S1A0A5B6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.22■■□□□ 1.31
TCRBV3S1A0A5B6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV3S1A0A5B6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV3S1A0A5B6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV3S1A0A5B6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV3S1A0A5B6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV3S1A0A5B6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TCRBV3S1A0A5B6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TCRBV3S1A0A5B6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.2■■□□□ 1.3
TCRBV3S1A0A5B6 AC142381.3-201ENST00000568208 1670 ntBASIC23.19■■□□□ 1.3
TCRBV3S1A0A5B6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV3S1A0A5B6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV3S1A0A5B6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV3S1A0A5B6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.18■■□□□ 1.3
TCRBV3S1A0A5B6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TCRBV3S1A0A5B6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TCRBV3S1A0A5B6 RARRES2P7-201ENST00000567349 469 ntBASIC23.18■■□□□ 1.3
TCRBV3S1A0A5B6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV3S1A0A5B6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TCRBV3S1A0A5B6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TCRBV3S1A0A5B6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV3S1A0A5B6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV3S1A0A5B6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV3S1A0A5B6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV3S1A0A5B6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TCRBV3S1A0A5B6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV3S1A0A5B6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV3S1A0A5B6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV3S1A0A5B6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.16■■□□□ 1.3
TCRBV3S1A0A5B6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV3S1A0A5B6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV3S1A0A5B6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.15■■□□□ 1.3
TCRBV3S1A0A5B6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.15■■□□□ 1.3
TCRBV3S1A0A5B6 CAHM-201ENST00000604200 896 ntBASIC23.15■■□□□ 1.3
TCRBV3S1A0A5B6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.15■■□□□ 1.3
TCRBV3S1A0A5B6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV3S1A0A5B6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV3S1A0A5B6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
TCRBV3S1A0A5B6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCRBV3S1A0A5B6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCRBV3S1A0A5B6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV3S1A0A5B6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV3S1A0A5B6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV3S1A0A5B6 AC010501.1-201ENST00000606270 1962 ntBASIC23.13■■□□□ 1.29
TCRBV3S1A0A5B6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
TCRBV3S1A0A5B6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.13■■□□□ 1.29
TCRBV3S1A0A5B6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV3S1A0A5B6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV3S1A0A5B6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV3S1A0A5B6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV3S1A0A5B6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
TCRBV3S1A0A5B6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TCRBV3S1A0A5B6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV3S1A0A5B6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV3S1A0A5B6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TCRBV3S1A0A5B6 LINC00273-201ENST00000539813 1452 ntBASIC23.11■■□□□ 1.29
TCRBV3S1A0A5B6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TCRBV3S1A0A5B6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV3S1A0A5B6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV3S1A0A5B6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.1■■□□□ 1.29
TCRBV3S1A0A5B6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV3S1A0A5B6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.1■■□□□ 1.29
TCRBV3S1A0A5B6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV3S1A0A5B6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.1■■□□□ 1.29
TCRBV3S1A0A5B6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TCRBV3S1A0A5B6 AL139125.2-201ENST00000623134 1869 ntBASIC23.09■■□□□ 1.29
TCRBV3S1A0A5B6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TCRBV3S1A0A5B6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TCRBV3S1A0A5B6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.09■■□□□ 1.29
TCRBV3S1A0A5B6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TCRBV3S1A0A5B6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TCRBV3S1A0A5B6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TCRBV3S1A0A5B6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TCRBV3S1A0A5B6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.08■■□□□ 1.29
TCRBV3S1A0A5B6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TCRBV3S1A0A5B6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TCRBV3S1A0A5B6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TCRBV3S1A0A5B6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TCRBV3S1A0A5B6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.07■■□□□ 1.28
TCRBV3S1A0A5B6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.07■■□□□ 1.28
TCRBV3S1A0A5B6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.07■■□□□ 1.28
TCRBV3S1A0A5B6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.07■■□□□ 1.28
TCRBV3S1A0A5B6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCRBV3S1A0A5B6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCRBV3S1A0A5B6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCRBV3S1A0A5B6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCRBV3S1A0A5B6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.06■■□□□ 1.28
TCRBV3S1A0A5B6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCRBV3S1A0A5B6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCRBV3S1A0A5B6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCRBV3S1A0A5B6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TCRBV3S1A0A5B6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TCRBV3S1A0A5B6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms