Protein–RNA interactions for Protein: A0A075B6U6

TRAV8-7, T-cell receptor alpha variable 8-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-7A0A075B6U6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.43■■□□□ 1.02
TRAV8-7A0A075B6U6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV8-7A0A075B6U6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV8-7A0A075B6U6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.42■■□□□ 1.02
TRAV8-7A0A075B6U6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
TRAV8-7A0A075B6U6 AC110285.7-201ENST00000624417 1536 ntBASIC21.42■■□□□ 1.02
TRAV8-7A0A075B6U6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV8-7A0A075B6U6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV8-7A0A075B6U6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.41■■□□□ 1.02
TRAV8-7A0A075B6U6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.41■■□□□ 1.02
TRAV8-7A0A075B6U6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
TRAV8-7A0A075B6U6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.41■■□□□ 1.02
TRAV8-7A0A075B6U6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV8-7A0A075B6U6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV8-7A0A075B6U6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV8-7A0A075B6U6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV8-7A0A075B6U6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
TRAV8-7A0A075B6U6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV8-7A0A075B6U6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRAV8-7A0A075B6U6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV8-7A0A075B6U6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV8-7A0A075B6U6 MIR3665-201ENST00000578708 105 ntBASIC21.39■■□□□ 1.01
TRAV8-7A0A075B6U6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.39■■□□□ 1.01
TRAV8-7A0A075B6U6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
TRAV8-7A0A075B6U6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
TRAV8-7A0A075B6U6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
TRAV8-7A0A075B6U6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.38■■□□□ 1.01
TRAV8-7A0A075B6U6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV8-7A0A075B6U6 WHAMMP3-201ENST00000611636 1609 ntBASIC21.38■■□□□ 1.01
TRAV8-7A0A075B6U6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRAV8-7A0A075B6U6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.38■■□□□ 1.01
TRAV8-7A0A075B6U6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.38■■□□□ 1.01
TRAV8-7A0A075B6U6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV8-7A0A075B6U6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.37■■□□□ 1.01
TRAV8-7A0A075B6U6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV8-7A0A075B6U6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV8-7A0A075B6U6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.37■■□□□ 1.01
TRAV8-7A0A075B6U6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV8-7A0A075B6U6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV8-7A0A075B6U6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV8-7A0A075B6U6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV8-7A0A075B6U6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV8-7A0A075B6U6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV8-7A0A075B6U6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV8-7A0A075B6U6 AC093323.1-202ENST00000635031 2045 ntBASIC21.36■■□□□ 1.01
TRAV8-7A0A075B6U6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAV8-7A0A075B6U6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.35■■□□□ 1.01
TRAV8-7A0A075B6U6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAV8-7A0A075B6U6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV8-7A0A075B6U6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV8-7A0A075B6U6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV8-7A0A075B6U6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV8-7A0A075B6U6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV8-7A0A075B6U6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV8-7A0A075B6U6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV8-7A0A075B6U6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV8-7A0A075B6U6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRAV8-7A0A075B6U6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV8-7A0A075B6U6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV8-7A0A075B6U6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.33■■□□□ 1.01
TRAV8-7A0A075B6U6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV8-7A0A075B6U6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRAV8-7A0A075B6U6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.33■■□□□ 1
TRAV8-7A0A075B6U6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV8-7A0A075B6U6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.32■■□□□ 1
TRAV8-7A0A075B6U6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TRAV8-7A0A075B6U6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV8-7A0A075B6U6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV8-7A0A075B6U6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV8-7A0A075B6U6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV8-7A0A075B6U6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
TRAV8-7A0A075B6U6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV8-7A0A075B6U6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV8-7A0A075B6U6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
TRAV8-7A0A075B6U6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.31■■□□□ 1
TRAV8-7A0A075B6U6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV8-7A0A075B6U6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV8-7A0A075B6U6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV8-7A0A075B6U6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV8-7A0A075B6U6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAV8-7A0A075B6U6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAV8-7A0A075B6U6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.3■■□□□ 1
TRAV8-7A0A075B6U6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRAV8-7A0A075B6U6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAV8-7A0A075B6U6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV8-7A0A075B6U6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.29■■□□□ 1
TRAV8-7A0A075B6U6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRAV8-7A0A075B6U6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.29■■□□□ 1
TRAV8-7A0A075B6U6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV8-7A0A075B6U6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV8-7A0A075B6U6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV8-7A0A075B6U6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV8-7A0A075B6U6 AC087741.3-201ENST00000624270 1347 ntBASIC21.29■■□□□ 1
TRAV8-7A0A075B6U6 ERN1-208ENST00000606895 2068 ntBASIC21.28■■□□□ 1
TRAV8-7A0A075B6U6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.28■■□□□ 1
TRAV8-7A0A075B6U6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV8-7A0A075B6U6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAV8-7A0A075B6U6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRAV8-7A0A075B6U6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV8-7A0A075B6U6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms