Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
PCDHGA6Q9Y5G7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDHGA6Q9Y5G7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA6Q9Y5G7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA6Q9Y5G7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA6Q9Y5G7 AC060814.1-201ENST00000554326 538 ntBASIC23.94■■□□□ 1.42
PCDHGA6Q9Y5G7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA6Q9Y5G7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA6Q9Y5G7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA6Q9Y5G7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PCDHGA6Q9Y5G7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.93■■□□□ 1.42
PCDHGA6Q9Y5G7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA6Q9Y5G7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA6Q9Y5G7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PCDHGA6Q9Y5G7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA6Q9Y5G7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA6Q9Y5G7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PCDHGA6Q9Y5G7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PCDHGA6Q9Y5G7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA6Q9Y5G7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA6Q9Y5G7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHGA6Q9Y5G7 MIR219A2-201ENST00000608502 1504 ntBASIC23.91■■□□□ 1.42
PCDHGA6Q9Y5G7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDHGA6Q9Y5G7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA6Q9Y5G7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA6Q9Y5G7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA6Q9Y5G7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PCDHGA6Q9Y5G7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA6Q9Y5G7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA6Q9Y5G7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA6Q9Y5G7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGA6Q9Y5G7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGA6Q9Y5G7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGA6Q9Y5G7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
PCDHGA6Q9Y5G7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGA6Q9Y5G7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGA6Q9Y5G7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.89■■□□□ 1.41
PCDHGA6Q9Y5G7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA6Q9Y5G7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
PCDHGA6Q9Y5G7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA6Q9Y5G7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA6Q9Y5G7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.88■■□□□ 1.41
PCDHGA6Q9Y5G7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PCDHGA6Q9Y5G7 AC012354.3-201ENST00000623734 483 ntBASIC23.88■■□□□ 1.41
PCDHGA6Q9Y5G7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA6Q9Y5G7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA6Q9Y5G7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA6Q9Y5G7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA6Q9Y5G7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA6Q9Y5G7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA6Q9Y5G7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA6Q9Y5G7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
PCDHGA6Q9Y5G7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
PCDHGA6Q9Y5G7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.84■■□□□ 1.41
PCDHGA6Q9Y5G7 AC092296.2-201ENST00000589470 999 ntBASIC23.84■■□□□ 1.41
PCDHGA6Q9Y5G7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA6Q9Y5G7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA6Q9Y5G7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA6Q9Y5G7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA6Q9Y5G7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.83■■□□□ 1.41
PCDHGA6Q9Y5G7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGA6Q9Y5G7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA6Q9Y5G7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA6Q9Y5G7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHGA6Q9Y5G7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA6Q9Y5G7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHGA6Q9Y5G7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA6Q9Y5G7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA6Q9Y5G7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA6Q9Y5G7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA6Q9Y5G7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA6Q9Y5G7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHGA6Q9Y5G7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA6Q9Y5G7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PCDHGA6Q9Y5G7 AP004833.2-201ENST00000532228 1454 ntBASIC23.81■■□□□ 1.4
PCDHGA6Q9Y5G7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PCDHGA6Q9Y5G7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA6Q9Y5G7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHGA6Q9Y5G7 AC126177.7-201ENST00000547904 679 ntBASIC23.8■■□□□ 1.4
PCDHGA6Q9Y5G7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHGA6Q9Y5G7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHGA6Q9Y5G7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA6Q9Y5G7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA6Q9Y5G7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHGA6Q9Y5G7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA6Q9Y5G7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA6Q9Y5G7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA6Q9Y5G7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHGA6Q9Y5G7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA6Q9Y5G7 ECEL1P2-201ENST00000461596 1295 ntBASIC23.78■■□□□ 1.4
PCDHGA6Q9Y5G7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHGA6Q9Y5G7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA6Q9Y5G7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA6Q9Y5G7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA6Q9Y5G7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PCDHGA6Q9Y5G7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA6Q9Y5G7 U85056.1-201ENST00000616429 682 ntBASIC23.77■■□□□ 1.4
PCDHGA6Q9Y5G7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA6Q9Y5G7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHGA6Q9Y5G7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms