Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALX4Q9H161 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALX4Q9H161 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ALX4Q9H161 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ALX4Q9H161 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ALX4Q9H161 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ALX4Q9H161 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.96■□□□□ 0.95
ALX4Q9H161 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALX4Q9H161 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.96■□□□□ 0.95
ALX4Q9H161 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ALX4Q9H161 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ALX4Q9H161 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.95■□□□□ 0.94
ALX4Q9H161 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALX4Q9H161 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALX4Q9H161 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ALX4Q9H161 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ALX4Q9H161 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALX4Q9H161 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALX4Q9H161 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALX4Q9H161 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ALX4Q9H161 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALX4Q9H161 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.93■□□□□ 0.94
ALX4Q9H161 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALX4Q9H161 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALX4Q9H161 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALX4Q9H161 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.93■□□□□ 0.94
ALX4Q9H161 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALX4Q9H161 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.92■□□□□ 0.94
ALX4Q9H161 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALX4Q9H161 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.92■□□□□ 0.94
ALX4Q9H161 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
ALX4Q9H161 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ALX4Q9H161 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.92■□□□□ 0.94
ALX4Q9H161 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALX4Q9H161 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.92■□□□□ 0.94
ALX4Q9H161 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALX4Q9H161 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.91■□□□□ 0.94
ALX4Q9H161 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALX4Q9H161 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.91■□□□□ 0.94
ALX4Q9H161 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ALX4Q9H161 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALX4Q9H161 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.9■□□□□ 0.94
ALX4Q9H161 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALX4Q9H161 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.9■□□□□ 0.94
ALX4Q9H161 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ALX4Q9H161 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ALX4Q9H161 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ALX4Q9H161 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ALX4Q9H161 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ALX4Q9H161 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ALX4Q9H161 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ALX4Q9H161 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ALX4Q9H161 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ALX4Q9H161 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.88■□□□□ 0.93
ALX4Q9H161 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALX4Q9H161 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ALX4Q9H161 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALX4Q9H161 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALX4Q9H161 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ALX4Q9H161 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALX4Q9H161 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALX4Q9H161 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALX4Q9H161 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ALX4Q9H161 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALX4Q9H161 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALX4Q9H161 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALX4Q9H161 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.86■□□□□ 0.93
ALX4Q9H161 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALX4Q9H161 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ALX4Q9H161 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALX4Q9H161 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALX4Q9H161 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
ALX4Q9H161 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALX4Q9H161 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALX4Q9H161 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.84■□□□□ 0.93
ALX4Q9H161 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ALX4Q9H161 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALX4Q9H161 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.84■□□□□ 0.93
ALX4Q9H161 MIR762-201ENST00000390236 83 ntBASIC20.84■□□□□ 0.93
ALX4Q9H161 ERN1-208ENST00000606895 2068 ntBASIC20.84■□□□□ 0.93
ALX4Q9H161 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALX4Q9H161 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.83■□□□□ 0.93
ALX4Q9H161 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.83■□□□□ 0.93
ALX4Q9H161 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.83■□□□□ 0.93
ALX4Q9H161 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ALX4Q9H161 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ALX4Q9H161 RPS2P35-201ENST00000443417 897 ntBASIC20.82■□□□□ 0.92
ALX4Q9H161 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALX4Q9H161 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ALX4Q9H161 AL162393.1-201ENST00000437852 946 ntBASIC20.81■□□□□ 0.92
ALX4Q9H161 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
ALX4Q9H161 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.8■□□□□ 0.92
ALX4Q9H161 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.8■□□□□ 0.92
ALX4Q9H161 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALX4Q9H161 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALX4Q9H161 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALX4Q9H161 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALX4Q9H161 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALX4Q9H161 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALX4Q9H161 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms