Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RNF5Q99942 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF5Q99942 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
RNF5Q99942 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF5Q99942 MIR3648-2-201ENST00000581792 180 ntBASIC19.97■□□□□ 0.79
RNF5Q99942 MIR3648-1-201ENST00000615959 180 ntBASIC19.97■□□□□ 0.79
RNF5Q99942 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RNF5Q99942 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF5Q99942 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF5Q99942 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF5Q99942 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF5Q99942 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RNF5Q99942 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF5Q99942 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF5Q99942 WHAMMP3-201ENST00000611636 1609 ntBASIC19.95■□□□□ 0.78
RNF5Q99942 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
RNF5Q99942 CR559946.2-201ENST00000623684 991 ntBASIC19.95■□□□□ 0.78
RNF5Q99942 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.95■□□□□ 0.78
RNF5Q99942 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF5Q99942 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF5Q99942 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF5Q99942 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF5Q99942 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
RNF5Q99942 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF5Q99942 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF5Q99942 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RNF5Q99942 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF5Q99942 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF5Q99942 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF5Q99942 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF5Q99942 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF5Q99942 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF5Q99942 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF5Q99942 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF5Q99942 MIR219A2-201ENST00000608502 1504 ntBASIC19.92■□□□□ 0.78
RNF5Q99942 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF5Q99942 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF5Q99942 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF5Q99942 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF5Q99942 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF5Q99942 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
RNF5Q99942 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RNF5Q99942 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF5Q99942 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RNF5Q99942 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF5Q99942 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF5Q99942 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF5Q99942 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF5Q99942 MIR7108-201ENST00000614319 87 ntBASIC19.9■□□□□ 0.78
RNF5Q99942 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF5Q99942 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF5Q99942 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF5Q99942 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RNF5Q99942 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF5Q99942 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RNF5Q99942 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF5Q99942 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RNF5Q99942 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RNF5Q99942 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
RNF5Q99942 AL449106.1-201ENST00000608517 1980 ntBASIC19.89■□□□□ 0.77
RNF5Q99942 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF5Q99942 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF5Q99942 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF5Q99942 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF5Q99942 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF5Q99942 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF5Q99942 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF5Q99942 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF5Q99942 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
RNF5Q99942 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF5Q99942 HLA-V-202ENST00000446817 847 ntBASIC19.87■□□□□ 0.77
RNF5Q99942 AC016575.1-201ENST00000607026 382 ntBASIC19.87■□□□□ 0.77
RNF5Q99942 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RNF5Q99942 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RNF5Q99942 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF5Q99942 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF5Q99942 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF5Q99942 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF5Q99942 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF5Q99942 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.86■□□□□ 0.77
RNF5Q99942 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF5Q99942 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF5Q99942 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF5Q99942 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF5Q99942 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RNF5Q99942 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF5Q99942 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF5Q99942 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF5Q99942 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF5Q99942 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF5Q99942 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF5Q99942 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RNF5Q99942 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF5Q99942 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF5Q99942 AC142472.1-201ENST00000612013 1741 ntBASIC19.83■□□□□ 0.77
RNF5Q99942 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF5Q99942 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF5Q99942 AC126177.7-201ENST00000547904 679 ntBASIC19.83■□□□□ 0.77
RNF5Q99942 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RNF5Q99942 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms