Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXB1Q99853 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
FOXB1Q99853 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXB1Q99853 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXB1Q99853 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
FOXB1Q99853 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXB1Q99853 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.96■■□□□ 1.11
FOXB1Q99853 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXB1Q99853 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
FOXB1Q99853 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
FOXB1Q99853 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
FOXB1Q99853 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.96■■□□□ 1.11
FOXB1Q99853 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXB1Q99853 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXB1Q99853 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXB1Q99853 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXB1Q99853 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
FOXB1Q99853 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXB1Q99853 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.95■■□□□ 1.1
FOXB1Q99853 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXB1Q99853 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
FOXB1Q99853 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXB1Q99853 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXB1Q99853 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
FOXB1Q99853 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
FOXB1Q99853 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXB1Q99853 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXB1Q99853 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXB1Q99853 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXB1Q99853 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
FOXB1Q99853 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXB1Q99853 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXB1Q99853 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXB1Q99853 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXB1Q99853 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.93■■□□□ 1.1
FOXB1Q99853 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
FOXB1Q99853 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.93■■□□□ 1.1
FOXB1Q99853 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXB1Q99853 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXB1Q99853 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXB1Q99853 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXB1Q99853 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXB1Q99853 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXB1Q99853 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
FOXB1Q99853 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.91■■□□□ 1.1
FOXB1Q99853 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXB1Q99853 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
FOXB1Q99853 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXB1Q99853 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXB1Q99853 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
FOXB1Q99853 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
FOXB1Q99853 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
FOXB1Q99853 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
FOXB1Q99853 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
FOXB1Q99853 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
FOXB1Q99853 WHAMMP3-201ENST00000611636 1609 ntBASIC21.88■■□□□ 1.09
FOXB1Q99853 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
FOXB1Q99853 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.88■■□□□ 1.09
FOXB1Q99853 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.88■■□□□ 1.09
FOXB1Q99853 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.88■■□□□ 1.09
FOXB1Q99853 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
FOXB1Q99853 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXB1Q99853 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXB1Q99853 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
FOXB1Q99853 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXB1Q99853 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
FOXB1Q99853 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
FOXB1Q99853 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.87■■□□□ 1.09
FOXB1Q99853 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
FOXB1Q99853 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXB1Q99853 MIR4449-201ENST00000578365 66 ntBASIC21.86■■□□□ 1.09
FOXB1Q99853 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
FOXB1Q99853 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
FOXB1Q99853 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
FOXB1Q99853 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXB1Q99853 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.85■■□□□ 1.09
FOXB1Q99853 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
FOXB1Q99853 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
FOXB1Q99853 AL449106.1-201ENST00000608517 1980 ntBASIC21.85■■□□□ 1.09
FOXB1Q99853 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXB1Q99853 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXB1Q99853 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXB1Q99853 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXB1Q99853 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXB1Q99853 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXB1Q99853 AL121749.1-202ENST00000609313 2153 ntBASIC21.83■■□□□ 1.09
FOXB1Q99853 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FOXB1Q99853 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.83■■□□□ 1.09
FOXB1Q99853 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms