Protein–RNA interactions for Protein: Q99836

MYD88, Myeloid differentiation primary response protein MyD88, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88Q99836 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
MYD88Q99836 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
MYD88Q99836 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.69■■■□□ 2.66
MYD88Q99836 AL359258.2-201ENST00000564063 1566 ntBASIC31.68■■■□□ 2.66
MYD88Q99836 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.67■■■□□ 2.66
MYD88Q99836 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
MYD88Q99836 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.66■■■□□ 2.66
MYD88Q99836 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
MYD88Q99836 ECEL1P2-201ENST00000461596 1295 ntBASIC31.66■■■□□ 2.66
MYD88Q99836 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
MYD88Q99836 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
MYD88Q99836 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
MYD88Q99836 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
MYD88Q99836 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
MYD88Q99836 NTF6A-201ENST00000591175 560 ntBASIC31.63■■■□□ 2.65
MYD88Q99836 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.63■■■□□ 2.65
MYD88Q99836 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.63■■■□□ 2.65
MYD88Q99836 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
MYD88Q99836 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
MYD88Q99836 AC018358.1-201ENST00000631079 1402 ntBASIC31.61■■■□□ 2.65
MYD88Q99836 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.61■■■□□ 2.65
MYD88Q99836 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
MYD88Q99836 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
MYD88Q99836 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
MYD88Q99836 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
MYD88Q99836 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.6■■■□□ 2.65
MYD88Q99836 U85056.1-201ENST00000616429 682 ntBASIC31.6■■■□□ 2.65
MYD88Q99836 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
MYD88Q99836 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
MYD88Q99836 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
MYD88Q99836 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
MYD88Q99836 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.59■■■□□ 2.65
MYD88Q99836 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.59■■■□□ 2.65
MYD88Q99836 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.59■■■□□ 2.65
MYD88Q99836 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.59■■■□□ 2.65
MYD88Q99836 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
MYD88Q99836 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
MYD88Q99836 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.58■■■□□ 2.65
MYD88Q99836 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.58■■■□□ 2.65
MYD88Q99836 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.58■■■□□ 2.65
MYD88Q99836 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
MYD88Q99836 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
MYD88Q99836 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
MYD88Q99836 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
MYD88Q99836 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
MYD88Q99836 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
MYD88Q99836 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
MYD88Q99836 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
MYD88Q99836 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
MYD88Q99836 DRD5P2-201ENST00000421395 2012 ntBASIC31.56■■■□□ 2.64
MYD88Q99836 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.56■■■□□ 2.64
MYD88Q99836 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
MYD88Q99836 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
MYD88Q99836 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
MYD88Q99836 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.55■■■□□ 2.64
MYD88Q99836 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
MYD88Q99836 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
MYD88Q99836 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
MYD88Q99836 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
MYD88Q99836 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
MYD88Q99836 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
MYD88Q99836 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.53■■■□□ 2.64
MYD88Q99836 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
MYD88Q99836 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.52■■■□□ 2.64
MYD88Q99836 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
MYD88Q99836 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
MYD88Q99836 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
MYD88Q99836 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.49■■■□□ 2.63
MYD88Q99836 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
MYD88Q99836 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MYD88Q99836 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
MYD88Q99836 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
MYD88Q99836 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
MYD88Q99836 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
MYD88Q99836 AC007029.1-201ENST00000604183 313 ntBASIC31.46■■■□□ 2.63
MYD88Q99836 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
MYD88Q99836 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.46■■■□□ 2.63
MYD88Q99836 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
MYD88Q99836 SMPD5-203ENST00000639008 1464 ntBASIC31.46■■■□□ 2.63
MYD88Q99836 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.45■■■□□ 2.63
MYD88Q99836 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
MYD88Q99836 AC012354.3-201ENST00000623734 483 ntBASIC31.44■■■□□ 2.62
MYD88Q99836 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
MYD88Q99836 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
MYD88Q99836 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
MYD88Q99836 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.43■■■□□ 2.62
MYD88Q99836 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.43■■■□□ 2.62
MYD88Q99836 KRT18P60-201ENST00000312876 1297 ntBASIC31.42■■■□□ 2.62
MYD88Q99836 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.42■■■□□ 2.62
MYD88Q99836 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
MYD88Q99836 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
MYD88Q99836 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.41■■■□□ 2.62
MYD88Q99836 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.41■■■□□ 2.62
MYD88Q99836 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.41■■■□□ 2.62
MYD88Q99836 AC025884.2-201ENST00000553429 711 ntBASIC31.41■■■□□ 2.62
MYD88Q99836 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
MYD88Q99836 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
MYD88Q99836 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
MYD88Q99836 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.61
MYD88Q99836 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms