Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
EXD3Q8N9H8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
EXD3Q8N9H8 AC127502.1-201ENST00000399971 1502 ntBASIC23.54■■□□□ 1.36
EXD3Q8N9H8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
EXD3Q8N9H8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.54■■□□□ 1.36
EXD3Q8N9H8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.54■■□□□ 1.36
EXD3Q8N9H8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
EXD3Q8N9H8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.53■■□□□ 1.36
EXD3Q8N9H8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.53■■□□□ 1.36
EXD3Q8N9H8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
EXD3Q8N9H8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.52■■□□□ 1.36
EXD3Q8N9H8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
EXD3Q8N9H8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
EXD3Q8N9H8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
EXD3Q8N9H8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
EXD3Q8N9H8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
EXD3Q8N9H8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
EXD3Q8N9H8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
EXD3Q8N9H8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
EXD3Q8N9H8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.5■■□□□ 1.35
EXD3Q8N9H8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
EXD3Q8N9H8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
EXD3Q8N9H8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
EXD3Q8N9H8 AL592293.1-201ENST00000502889 1188 ntBASIC23.49■■□□□ 1.35
EXD3Q8N9H8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.49■■□□□ 1.35
EXD3Q8N9H8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
EXD3Q8N9H8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
EXD3Q8N9H8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
EXD3Q8N9H8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
EXD3Q8N9H8 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.47■■□□□ 1.35
EXD3Q8N9H8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
EXD3Q8N9H8 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.47■■□□□ 1.35
EXD3Q8N9H8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
EXD3Q8N9H8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.47■■□□□ 1.35
EXD3Q8N9H8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
EXD3Q8N9H8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
EXD3Q8N9H8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
EXD3Q8N9H8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
EXD3Q8N9H8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
EXD3Q8N9H8 AL157400.5-201ENST00000507624 621 ntBASIC23.45■■□□□ 1.34
EXD3Q8N9H8 AC133552.2-201ENST00000619106 1032 ntBASIC23.45■■□□□ 1.34
EXD3Q8N9H8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
EXD3Q8N9H8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
EXD3Q8N9H8 AC009831.1-201ENST00000580420 1582 ntBASIC23.44■■□□□ 1.34
EXD3Q8N9H8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
EXD3Q8N9H8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
EXD3Q8N9H8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
EXD3Q8N9H8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
EXD3Q8N9H8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.44■■□□□ 1.34
EXD3Q8N9H8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.44■■□□□ 1.34
EXD3Q8N9H8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.44■■□□□ 1.34
EXD3Q8N9H8 AC007029.1-201ENST00000604183 313 ntBASIC23.44■■□□□ 1.34
EXD3Q8N9H8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
EXD3Q8N9H8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.43■■□□□ 1.34
EXD3Q8N9H8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
EXD3Q8N9H8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
EXD3Q8N9H8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
EXD3Q8N9H8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
EXD3Q8N9H8 AC126177.7-201ENST00000547904 679 ntBASIC23.43■■□□□ 1.34
EXD3Q8N9H8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
EXD3Q8N9H8 AL139393.2-201ENST00000608721 2025 ntBASIC23.42■■□□□ 1.34
EXD3Q8N9H8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.42■■□□□ 1.34
EXD3Q8N9H8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
EXD3Q8N9H8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
EXD3Q8N9H8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.41■■□□□ 1.34
EXD3Q8N9H8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
EXD3Q8N9H8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
EXD3Q8N9H8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.41■■□□□ 1.34
EXD3Q8N9H8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
EXD3Q8N9H8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
EXD3Q8N9H8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
EXD3Q8N9H8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.4■■□□□ 1.34
EXD3Q8N9H8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.4■■□□□ 1.34
EXD3Q8N9H8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.39■■□□□ 1.34
EXD3Q8N9H8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.39■■□□□ 1.33
EXD3Q8N9H8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
EXD3Q8N9H8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
EXD3Q8N9H8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
EXD3Q8N9H8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
EXD3Q8N9H8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.38■■□□□ 1.33
EXD3Q8N9H8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.38■■□□□ 1.33
EXD3Q8N9H8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.38■■□□□ 1.33
EXD3Q8N9H8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
EXD3Q8N9H8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
EXD3Q8N9H8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
EXD3Q8N9H8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
EXD3Q8N9H8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
EXD3Q8N9H8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.37■■□□□ 1.33
EXD3Q8N9H8 AC131212.1-201ENST00000613771 668 ntBASIC23.37■■□□□ 1.33
EXD3Q8N9H8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
EXD3Q8N9H8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
EXD3Q8N9H8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EXD3Q8N9H8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EXD3Q8N9H8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
EXD3Q8N9H8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EXD3Q8N9H8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.34■■□□□ 1.33
EXD3Q8N9H8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
EXD3Q8N9H8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EXD3Q8N9H8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EXD3Q8N9H8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms