Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HPS6Q86YV9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HPS6Q86YV9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HPS6Q86YV9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HPS6Q86YV9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
HPS6Q86YV9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
HPS6Q86YV9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
HPS6Q86YV9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
HPS6Q86YV9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HPS6Q86YV9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.39■■□□□ 1.49
HPS6Q86YV9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
HPS6Q86YV9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
HPS6Q86YV9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HPS6Q86YV9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
HPS6Q86YV9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HPS6Q86YV9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
HPS6Q86YV9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.37■■□□□ 1.49
HPS6Q86YV9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HPS6Q86YV9 AC091060.1-201ENST00000623524 1766 ntBASIC24.37■■□□□ 1.49
HPS6Q86YV9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HPS6Q86YV9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
HPS6Q86YV9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.36■■□□□ 1.49
HPS6Q86YV9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.36■■□□□ 1.49
HPS6Q86YV9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HPS6Q86YV9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HPS6Q86YV9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
HPS6Q86YV9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.35■■□□□ 1.49
HPS6Q86YV9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.35■■□□□ 1.49
HPS6Q86YV9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.35■■□□□ 1.49
HPS6Q86YV9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
HPS6Q86YV9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HPS6Q86YV9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
HPS6Q86YV9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HPS6Q86YV9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
HPS6Q86YV9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HPS6Q86YV9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HPS6Q86YV9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.34■■□□□ 1.49
HPS6Q86YV9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HPS6Q86YV9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.33■■□□□ 1.49
HPS6Q86YV9 DUX4L13-201ENST00000554103 1267 ntBASIC24.33■■□□□ 1.49
HPS6Q86YV9 DUX4L15-201ENST00000611059 1267 ntBASIC24.33■■□□□ 1.49
HPS6Q86YV9 DUX4L23-201ENST00000615195 1269 ntBASIC24.33■■□□□ 1.49
HPS6Q86YV9 DUX4L24-201ENST00000617576 1269 ntBASIC24.33■■□□□ 1.49
HPS6Q86YV9 DUX4L22-201ENST00000618238 1269 ntBASIC24.33■■□□□ 1.49
HPS6Q86YV9 DUX4L20-201ENST00000619712 1269 ntBASIC24.33■■□□□ 1.49
HPS6Q86YV9 DUX4L21-201ENST00000622058 1269 ntBASIC24.33■■□□□ 1.49
HPS6Q86YV9 DUX4L10-201ENST00000622460 1267 ntBASIC24.33■■□□□ 1.49
HPS6Q86YV9 DUX4L25-201ENST00000624915 1269 ntBASIC24.33■■□□□ 1.49
HPS6Q86YV9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HPS6Q86YV9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.33■■□□□ 1.49
HPS6Q86YV9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HPS6Q86YV9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.32■■□□□ 1.48
HPS6Q86YV9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
HPS6Q86YV9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HPS6Q86YV9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HPS6Q86YV9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HPS6Q86YV9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HPS6Q86YV9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
HPS6Q86YV9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
HPS6Q86YV9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HPS6Q86YV9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
HPS6Q86YV9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.31■■□□□ 1.48
HPS6Q86YV9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.3■■□□□ 1.48
HPS6Q86YV9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.3■■□□□ 1.48
HPS6Q86YV9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.3■■□□□ 1.48
HPS6Q86YV9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.3■■□□□ 1.48
HPS6Q86YV9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
HPS6Q86YV9 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.29■■□□□ 1.48
HPS6Q86YV9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HPS6Q86YV9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
HPS6Q86YV9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HPS6Q86YV9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.27■■□□□ 1.48
HPS6Q86YV9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
HPS6Q86YV9 AC020928.2-201ENST00000588717 2197 ntBASIC24.27■■□□□ 1.48
HPS6Q86YV9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
HPS6Q86YV9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.26■■□□□ 1.47
HPS6Q86YV9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HPS6Q86YV9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HPS6Q86YV9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.25■■□□□ 1.47
HPS6Q86YV9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
HPS6Q86YV9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
HPS6Q86YV9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
HPS6Q86YV9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HPS6Q86YV9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
HPS6Q86YV9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HPS6Q86YV9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HPS6Q86YV9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
HPS6Q86YV9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HPS6Q86YV9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
HPS6Q86YV9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.23■■□□□ 1.47
HPS6Q86YV9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HPS6Q86YV9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HPS6Q86YV9 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.22■■□□□ 1.47
HPS6Q86YV9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HPS6Q86YV9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
HPS6Q86YV9 AC100797.4-201ENST00000631653 1827 ntBASIC24.21■■□□□ 1.47
HPS6Q86YV9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HPS6Q86YV9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HPS6Q86YV9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HPS6Q86YV9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms