Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS13CQ709C8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS13CQ709C8 SPCS2P3-201ENST00000500401 656 ntBASIC21.16■□□□□ 0.98
VPS13CQ709C8 AC010980.1-201ENST00000587192 1142 ntBASIC21.16■□□□□ 0.98
VPS13CQ709C8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS13CQ709C8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS13CQ709C8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS13CQ709C8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS13CQ709C8 AC103834.1-201ENST00000520383 144 ntBASIC21.15■□□□□ 0.98
VPS13CQ709C8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS13CQ709C8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS13CQ709C8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.14■□□□□ 0.97
VPS13CQ709C8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.14■□□□□ 0.97
VPS13CQ709C8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS13CQ709C8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS13CQ709C8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS13CQ709C8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS13CQ709C8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS13CQ709C8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS13CQ709C8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS13CQ709C8 RAP2CP1-202ENST00000605179 643 ntBASIC21.13■□□□□ 0.97
VPS13CQ709C8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS13CQ709C8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS13CQ709C8 AC126177.7-201ENST00000547904 679 ntBASIC21.13■□□□□ 0.97
VPS13CQ709C8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS13CQ709C8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS13CQ709C8 GUSBP5-201ENST00000418136 578 ntBASIC21.12■□□□□ 0.97
VPS13CQ709C8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.12■□□□□ 0.97
VPS13CQ709C8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS13CQ709C8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS13CQ709C8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS13CQ709C8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VPS13CQ709C8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS13CQ709C8 SMPD5-203ENST00000639008 1464 ntBASIC21.11■□□□□ 0.97
VPS13CQ709C8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS13CQ709C8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.11■□□□□ 0.97
VPS13CQ709C8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS13CQ709C8 MIR935-201ENST00000401179 91 ntBASIC21.1■□□□□ 0.97
VPS13CQ709C8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS13CQ709C8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS13CQ709C8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS13CQ709C8 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS13CQ709C8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS13CQ709C8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS13CQ709C8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.09■□□□□ 0.97
VPS13CQ709C8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VPS13CQ709C8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VPS13CQ709C8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VPS13CQ709C8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VPS13CQ709C8 AC103724.3-201ENST00000564481 992 ntBASIC21.08■□□□□ 0.96
VPS13CQ709C8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VPS13CQ709C8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
VPS13CQ709C8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.08■□□□□ 0.96
VPS13CQ709C8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VPS13CQ709C8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.07■□□□□ 0.96
VPS13CQ709C8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
VPS13CQ709C8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS13CQ709C8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS13CQ709C8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS13CQ709C8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS13CQ709C8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.07■□□□□ 0.96
VPS13CQ709C8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS13CQ709C8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS13CQ709C8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS13CQ709C8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS13CQ709C8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VPS13CQ709C8 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS13CQ709C8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS13CQ709C8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS13CQ709C8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
VPS13CQ709C8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS13CQ709C8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS13CQ709C8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.06■□□□□ 0.96
VPS13CQ709C8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS13CQ709C8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS13CQ709C8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS13CQ709C8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
VPS13CQ709C8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.04■□□□□ 0.96
VPS13CQ709C8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
VPS13CQ709C8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VPS13CQ709C8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS13CQ709C8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS13CQ709C8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS13CQ709C8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS13CQ709C8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS13CQ709C8 BHLHE23-202ENST00000612929 1109 ntBASIC21.03■□□□□ 0.96
VPS13CQ709C8 ABCB10P3-201ENST00000561950 2166 ntBASIC21.03■□□□□ 0.96
VPS13CQ709C8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
VPS13CQ709C8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
VPS13CQ709C8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.03■□□□□ 0.96
VPS13CQ709C8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.03■□□□□ 0.96
VPS13CQ709C8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
VPS13CQ709C8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.02■□□□□ 0.96
VPS13CQ709C8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS13CQ709C8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS13CQ709C8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
VPS13CQ709C8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS13CQ709C8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS13CQ709C8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS13CQ709C8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms