Protein–RNA interactions for Protein: Q6P1A2

LPCAT3, Lysophospholipid acyltransferase 5, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3Q6P1A2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT3Q6P1A2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.91■□□□□ 0.94
LPCAT3Q6P1A2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT3Q6P1A2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT3Q6P1A2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT3Q6P1A2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT3Q6P1A2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT3Q6P1A2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT3Q6P1A2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT3Q6P1A2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT3Q6P1A2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LPCAT3Q6P1A2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.89■□□□□ 0.94
LPCAT3Q6P1A2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LPCAT3Q6P1A2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LPCAT3Q6P1A2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT3Q6P1A2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
LPCAT3Q6P1A2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.89■□□□□ 0.93
LPCAT3Q6P1A2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
LPCAT3Q6P1A2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT3Q6P1A2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT3Q6P1A2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT3Q6P1A2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LPCAT3Q6P1A2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LPCAT3Q6P1A2 AC018358.1-201ENST00000631079 1402 ntBASIC20.87■□□□□ 0.93
LPCAT3Q6P1A2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT3Q6P1A2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT3Q6P1A2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LPCAT3Q6P1A2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LPCAT3Q6P1A2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LPCAT3Q6P1A2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.85■□□□□ 0.93
LPCAT3Q6P1A2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LPCAT3Q6P1A2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LPCAT3Q6P1A2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LPCAT3Q6P1A2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.84■□□□□ 0.93
LPCAT3Q6P1A2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LPCAT3Q6P1A2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LPCAT3Q6P1A2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LPCAT3Q6P1A2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LPCAT3Q6P1A2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.83■□□□□ 0.93
LPCAT3Q6P1A2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LPCAT3Q6P1A2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LPCAT3Q6P1A2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.83■□□□□ 0.92
LPCAT3Q6P1A2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LPCAT3Q6P1A2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
LPCAT3Q6P1A2 AC092803.2-201ENST00000564287 1899 ntBASIC20.82■□□□□ 0.92
LPCAT3Q6P1A2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LPCAT3Q6P1A2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LPCAT3Q6P1A2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LPCAT3Q6P1A2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LPCAT3Q6P1A2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT3Q6P1A2 CAHM-201ENST00000604200 896 ntBASIC20.8■□□□□ 0.92
LPCAT3Q6P1A2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT3Q6P1A2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT3Q6P1A2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LPCAT3Q6P1A2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT3Q6P1A2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LPCAT3Q6P1A2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LPCAT3Q6P1A2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.79■□□□□ 0.92
LPCAT3Q6P1A2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LPCAT3Q6P1A2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LPCAT3Q6P1A2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LPCAT3Q6P1A2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.79■□□□□ 0.92
LPCAT3Q6P1A2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LPCAT3Q6P1A2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LPCAT3Q6P1A2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LPCAT3Q6P1A2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LPCAT3Q6P1A2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.78■□□□□ 0.92
LPCAT3Q6P1A2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LPCAT3Q6P1A2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LPCAT3Q6P1A2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LPCAT3Q6P1A2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LPCAT3Q6P1A2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LPCAT3Q6P1A2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LPCAT3Q6P1A2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LPCAT3Q6P1A2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.77■□□□□ 0.92
LPCAT3Q6P1A2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.77■□□□□ 0.91
LPCAT3Q6P1A2 AC135983.2-203ENST00000454486 1613 ntBASIC20.76■□□□□ 0.91
LPCAT3Q6P1A2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.76■□□□□ 0.91
LPCAT3Q6P1A2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT3Q6P1A2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT3Q6P1A2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
LPCAT3Q6P1A2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LPCAT3Q6P1A2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LPCAT3Q6P1A2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LPCAT3Q6P1A2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LPCAT3Q6P1A2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LPCAT3Q6P1A2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LPCAT3Q6P1A2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.74■□□□□ 0.91
LPCAT3Q6P1A2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LPCAT3Q6P1A2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms