Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.96■■□□□ 1.75
TTC39BQ5VTQ0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TTC39BQ5VTQ0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TTC39BQ5VTQ0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
TTC39BQ5VTQ0 MIR219A2-201ENST00000608502 1504 ntBASIC25.96■■□□□ 1.75
TTC39BQ5VTQ0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TTC39BQ5VTQ0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
TTC39BQ5VTQ0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.95■■□□□ 1.75
TTC39BQ5VTQ0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
TTC39BQ5VTQ0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
TTC39BQ5VTQ0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
TTC39BQ5VTQ0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TTC39BQ5VTQ0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TTC39BQ5VTQ0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
TTC39BQ5VTQ0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TTC39BQ5VTQ0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.94■■□□□ 1.74
TTC39BQ5VTQ0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.94■■□□□ 1.74
TTC39BQ5VTQ0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TTC39BQ5VTQ0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TTC39BQ5VTQ0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.93■■□□□ 1.74
TTC39BQ5VTQ0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TTC39BQ5VTQ0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TTC39BQ5VTQ0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TTC39BQ5VTQ0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
TTC39BQ5VTQ0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
TTC39BQ5VTQ0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TTC39BQ5VTQ0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.91■■□□□ 1.74
TTC39BQ5VTQ0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
TTC39BQ5VTQ0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TTC39BQ5VTQ0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.91■■□□□ 1.74
TTC39BQ5VTQ0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TTC39BQ5VTQ0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TTC39BQ5VTQ0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TTC39BQ5VTQ0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.9■■□□□ 1.74
TTC39BQ5VTQ0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TTC39BQ5VTQ0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.9■■□□□ 1.74
TTC39BQ5VTQ0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
TTC39BQ5VTQ0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TTC39BQ5VTQ0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TTC39BQ5VTQ0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TTC39BQ5VTQ0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.89■■□□□ 1.74
TTC39BQ5VTQ0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
TTC39BQ5VTQ0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
TTC39BQ5VTQ0 AC018358.1-201ENST00000631079 1402 ntBASIC25.88■■□□□ 1.73
TTC39BQ5VTQ0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
TTC39BQ5VTQ0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
TTC39BQ5VTQ0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
TTC39BQ5VTQ0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
TTC39BQ5VTQ0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
TTC39BQ5VTQ0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
TTC39BQ5VTQ0 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.87■■□□□ 1.73
TTC39BQ5VTQ0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
TTC39BQ5VTQ0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
TTC39BQ5VTQ0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
TTC39BQ5VTQ0 BX255925.1-201ENST00000566954 1854 ntBASIC25.86■■□□□ 1.73
TTC39BQ5VTQ0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TTC39BQ5VTQ0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.86■■□□□ 1.73
TTC39BQ5VTQ0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TTC39BQ5VTQ0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TTC39BQ5VTQ0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TTC39BQ5VTQ0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
TTC39BQ5VTQ0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
TTC39BQ5VTQ0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TTC39BQ5VTQ0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TTC39BQ5VTQ0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TTC39BQ5VTQ0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
TTC39BQ5VTQ0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TTC39BQ5VTQ0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
TTC39BQ5VTQ0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TTC39BQ5VTQ0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TTC39BQ5VTQ0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TTC39BQ5VTQ0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.82■■□□□ 1.72
TTC39BQ5VTQ0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TTC39BQ5VTQ0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TTC39BQ5VTQ0 AC126177.7-201ENST00000547904 679 ntBASIC25.82■■□□□ 1.72
TTC39BQ5VTQ0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.82■■□□□ 1.72
TTC39BQ5VTQ0 HSD17B1P1-201ENST00000590052 955 ntBASIC25.82■■□□□ 1.72
TTC39BQ5VTQ0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TTC39BQ5VTQ0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TTC39BQ5VTQ0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TTC39BQ5VTQ0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.81■■□□□ 1.72
TTC39BQ5VTQ0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
TTC39BQ5VTQ0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TTC39BQ5VTQ0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.81■■□□□ 1.72
TTC39BQ5VTQ0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
TTC39BQ5VTQ0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
TTC39BQ5VTQ0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.79■■□□□ 1.72
TTC39BQ5VTQ0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TTC39BQ5VTQ0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.79■■□□□ 1.72
TTC39BQ5VTQ0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
TTC39BQ5VTQ0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
TTC39BQ5VTQ0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
TTC39BQ5VTQ0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.78■■□□□ 1.72
TTC39BQ5VTQ0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TTC39BQ5VTQ0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TTC39BQ5VTQ0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
TTC39BQ5VTQ0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TTC39BQ5VTQ0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
TTC39BQ5VTQ0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TTC39BQ5VTQ0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms