Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
RC3H1Q5TC82 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
RC3H1Q5TC82 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
RC3H1Q5TC82 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.15■■■□□ 2.74
RC3H1Q5TC82 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RC3H1Q5TC82 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.15■■■□□ 2.74
RC3H1Q5TC82 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
RC3H1Q5TC82 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.14■■■□□ 2.74
RC3H1Q5TC82 TRIR-205ENST00000592273 783 ntTSL 3 BASIC32.14■■■□□ 2.74
RC3H1Q5TC82 RAP2CP1-202ENST00000605179 643 ntBASIC32.14■■■□□ 2.74
RC3H1Q5TC82 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
RC3H1Q5TC82 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
RC3H1Q5TC82 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
RC3H1Q5TC82 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RC3H1Q5TC82 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC32.12■■■□□ 2.73
RC3H1Q5TC82 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.12■■■□□ 2.73
RC3H1Q5TC82 AC100797.4-201ENST00000631653 1827 ntBASIC32.12■■■□□ 2.73
RC3H1Q5TC82 AC074183.2-201ENST00000623112 922 ntBASIC32.11■■■□□ 2.73
RC3H1Q5TC82 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
RC3H1Q5TC82 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
RC3H1Q5TC82 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.1■■■□□ 2.73
RC3H1Q5TC82 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
RC3H1Q5TC82 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RC3H1Q5TC82 AC093536.1-201ENST00000569153 554 ntBASIC32.09■■■□□ 2.73
RC3H1Q5TC82 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.09■■■□□ 2.73
RC3H1Q5TC82 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.09■■■□□ 2.73
RC3H1Q5TC82 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
RC3H1Q5TC82 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
RC3H1Q5TC82 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RC3H1Q5TC82 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.08■■■□□ 2.73
RC3H1Q5TC82 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
RC3H1Q5TC82 SPCS2P3-201ENST00000500401 656 ntBASIC32.07■■■□□ 2.72
RC3H1Q5TC82 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RC3H1Q5TC82 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC32.06■■■□□ 2.72
RC3H1Q5TC82 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
RC3H1Q5TC82 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC32.06■■■□□ 2.72
RC3H1Q5TC82 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RC3H1Q5TC82 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
RC3H1Q5TC82 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RC3H1Q5TC82 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
RC3H1Q5TC82 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.05■■■□□ 2.72
RC3H1Q5TC82 ST7-AS1-201ENST00000456775 1889 ntBASIC32.05■■■□□ 2.72
RC3H1Q5TC82 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.04■■■□□ 2.72
RC3H1Q5TC82 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC32.04■■■□□ 2.72
RC3H1Q5TC82 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RC3H1Q5TC82 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
RC3H1Q5TC82 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RC3H1Q5TC82 PFN2-211ENST00000489155 636 ntTSL 4 BASIC32.03■■■□□ 2.72
RC3H1Q5TC82 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
RC3H1Q5TC82 AC010980.1-201ENST00000587192 1142 ntBASIC32.03■■■□□ 2.72
RC3H1Q5TC82 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC32.03■■■□□ 2.72
RC3H1Q5TC82 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC32.02■■■□□ 2.72
RC3H1Q5TC82 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RC3H1Q5TC82 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RC3H1Q5TC82 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.01■■■□□ 2.72
RC3H1Q5TC82 BHLHE23-202ENST00000612929 1109 ntBASIC32.01■■■□□ 2.71
RC3H1Q5TC82 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
RC3H1Q5TC82 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RC3H1Q5TC82 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RC3H1Q5TC82 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC32■■■□□ 2.71
RC3H1Q5TC82 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.99■■■□□ 2.71
RC3H1Q5TC82 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
RC3H1Q5TC82 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
RC3H1Q5TC82 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.99■■■□□ 2.71
RC3H1Q5TC82 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.99■■■□□ 2.71
RC3H1Q5TC82 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.98■■■□□ 2.71
RC3H1Q5TC82 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
RC3H1Q5TC82 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RC3H1Q5TC82 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.97■■■□□ 2.71
RC3H1Q5TC82 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RC3H1Q5TC82 MIR3960-201ENST00000583311 91 ntBASIC31.97■■■□□ 2.71
RC3H1Q5TC82 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.96■■■□□ 2.71
RC3H1Q5TC82 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
RC3H1Q5TC82 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.96■■■□□ 2.71
RC3H1Q5TC82 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RC3H1Q5TC82 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
RC3H1Q5TC82 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RC3H1Q5TC82 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.95■■■□□ 2.71
RC3H1Q5TC82 AC103834.1-201ENST00000520383 144 ntBASIC31.95■■■□□ 2.71
RC3H1Q5TC82 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
RC3H1Q5TC82 MIR6765-201ENST00000614092 87 ntBASIC31.95■■■□□ 2.71
RC3H1Q5TC82 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
RC3H1Q5TC82 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
RC3H1Q5TC82 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RC3H1Q5TC82 AL592295.1-201ENST00000400984 884 ntBASIC31.94■■■□□ 2.7
RC3H1Q5TC82 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RC3H1Q5TC82 AC009299.2-201ENST00000482477 511 ntBASIC31.93■■■□□ 2.7
RC3H1Q5TC82 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RC3H1Q5TC82 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.92■■■□□ 2.7
RC3H1Q5TC82 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.92■■■□□ 2.7
RC3H1Q5TC82 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.92■■■□□ 2.7
RC3H1Q5TC82 KRT8P33-201ENST00000508125 1423 ntBASIC31.92■■■□□ 2.7
RC3H1Q5TC82 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RC3H1Q5TC82 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RC3H1Q5TC82 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.91■■■□□ 2.7
RC3H1Q5TC82 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
RC3H1Q5TC82 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
RC3H1Q5TC82 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.9■■■□□ 2.7
RC3H1Q5TC82 PVT1_1.1-201ENST00000615125 194 ntBASIC31.9■■■□□ 2.7
RC3H1Q5TC82 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms