Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC060814.1-201ENST00000554326 538 ntBASIC28.92■■■□□ 2.22
CCDC144BQ3MJ40 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.91■■■□□ 2.22
CCDC144BQ3MJ40 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.91■■■□□ 2.22
CCDC144BQ3MJ40 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.91■■■□□ 2.22
CCDC144BQ3MJ40 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CCDC144BQ3MJ40 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 AC012354.3-201ENST00000623734 483 ntBASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.89■■■□□ 2.21
CCDC144BQ3MJ40 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CCDC144BQ3MJ40 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.88■■■□□ 2.21
CCDC144BQ3MJ40 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CCDC144BQ3MJ40 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.88■■■□□ 2.21
CCDC144BQ3MJ40 MIR219A2-201ENST00000608502 1504 ntBASIC28.88■■■□□ 2.21
CCDC144BQ3MJ40 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCDC144BQ3MJ40 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCDC144BQ3MJ40 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCDC144BQ3MJ40 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
CCDC144BQ3MJ40 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
CCDC144BQ3MJ40 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CCDC144BQ3MJ40 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CCDC144BQ3MJ40 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CCDC144BQ3MJ40 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CCDC144BQ3MJ40 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.85■■■□□ 2.21
CCDC144BQ3MJ40 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
CCDC144BQ3MJ40 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CCDC144BQ3MJ40 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CCDC144BQ3MJ40 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
CCDC144BQ3MJ40 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CCDC144BQ3MJ40 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CCDC144BQ3MJ40 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CCDC144BQ3MJ40 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CCDC144BQ3MJ40 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.82■■■□□ 2.2
CCDC144BQ3MJ40 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.82■■■□□ 2.2
CCDC144BQ3MJ40 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CCDC144BQ3MJ40 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
CCDC144BQ3MJ40 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CCDC144BQ3MJ40 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 U85056.1-201ENST00000616429 682 ntBASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
CCDC144BQ3MJ40 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.8■■■□□ 2.2
CCDC144BQ3MJ40 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.8■■■□□ 2.2
CCDC144BQ3MJ40 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC144BQ3MJ40 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144BQ3MJ40 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144BQ3MJ40 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144BQ3MJ40 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144BQ3MJ40 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.78■■■□□ 2.2
CCDC144BQ3MJ40 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.78■■■□□ 2.2
CCDC144BQ3MJ40 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.78■■■□□ 2.2
CCDC144BQ3MJ40 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC144BQ3MJ40 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144BQ3MJ40 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144BQ3MJ40 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144BQ3MJ40 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144BQ3MJ40 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144BQ3MJ40 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC144BQ3MJ40 AC092296.2-201ENST00000589470 999 ntBASIC28.76■■■□□ 2.19
CCDC144BQ3MJ40 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
CCDC144BQ3MJ40 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC144BQ3MJ40 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC144BQ3MJ40 AC018358.1-201ENST00000631079 1402 ntBASIC28.75■■■□□ 2.19
CCDC144BQ3MJ40 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 AL033527.3-201ENST00000566366 1196 ntBASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 AC135731.1-201ENST00000569415 2548 ntBASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.71■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms