Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDH11P55287 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CDH11P55287 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.67■■□□□ 1.22
CDH11P55287 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDH11P55287 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CDH11P55287 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDH11P55287 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CDH11P55287 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDH11P55287 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDH11P55287 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.67■■□□□ 1.22
CDH11P55287 LINC01971-201ENST00000617888 1048 ntBASIC22.66■■□□□ 1.22
CDH11P55287 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH11P55287 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH11P55287 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDH11P55287 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDH11P55287 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CDH11P55287 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.65■■□□□ 1.22
CDH11P55287 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH11P55287 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.64■■□□□ 1.22
CDH11P55287 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
CDH11P55287 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.64■■□□□ 1.22
CDH11P55287 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.64■■□□□ 1.21
CDH11P55287 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.64■■□□□ 1.21
CDH11P55287 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.64■■□□□ 1.21
CDH11P55287 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH11P55287 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.64■■□□□ 1.21
CDH11P55287 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.64■■□□□ 1.21
CDH11P55287 AC018358.1-201ENST00000631079 1402 ntBASIC22.64■■□□□ 1.21
CDH11P55287 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDH11P55287 AC091060.1-201ENST00000623524 1766 ntBASIC22.63■■□□□ 1.21
CDH11P55287 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDH11P55287 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDH11P55287 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.62■■□□□ 1.21
CDH11P55287 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CDH11P55287 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.61■■□□□ 1.21
CDH11P55287 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CDH11P55287 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDH11P55287 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.6■■□□□ 1.21
CDH11P55287 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.6■■□□□ 1.21
CDH11P55287 DUX4L11-201ENST00000611504 1267 ntBASIC22.6■■□□□ 1.21
CDH11P55287 DUX4L12-201ENST00000614593 1267 ntBASIC22.6■■□□□ 1.21
CDH11P55287 DUX4L14-201ENST00000621227 1267 ntBASIC22.6■■□□□ 1.21
CDH11P55287 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDH11P55287 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.59■■□□□ 1.21
CDH11P55287 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.59■■□□□ 1.21
CDH11P55287 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.59■■□□□ 1.21
CDH11P55287 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDH11P55287 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDH11P55287 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDH11P55287 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.58■■□□□ 1.21
CDH11P55287 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CDH11P55287 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CDH11P55287 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDH11P55287 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDH11P55287 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.57■■□□□ 1.2
CDH11P55287 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CDH11P55287 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CDH11P55287 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.57■■□□□ 1.2
CDH11P55287 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.57■■□□□ 1.2
CDH11P55287 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
CDH11P55287 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.57■■□□□ 1.2
CDH11P55287 AC135983.2-203ENST00000454486 1613 ntBASIC22.57■■□□□ 1.2
CDH11P55287 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH11P55287 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH11P55287 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CDH11P55287 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDH11P55287 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH11P55287 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH11P55287 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH11P55287 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.55■■□□□ 1.2
CDH11P55287 MIR3648-2-201ENST00000581792 180 ntBASIC22.55■■□□□ 1.2
CDH11P55287 MIR3648-1-201ENST00000615959 180 ntBASIC22.55■■□□□ 1.2
CDH11P55287 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.55■■□□□ 1.2
CDH11P55287 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH11P55287 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDH11P55287 AC016575.1-201ENST00000607026 382 ntBASIC22.54■■□□□ 1.2
CDH11P55287 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH11P55287 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CDH11P55287 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.53■■□□□ 1.2
CDH11P55287 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH11P55287 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDH11P55287 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.53■■□□□ 1.2
CDH11P55287 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDH11P55287 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CDH11P55287 MIR639-201ENST00000384974 98 ntBASIC22.52■■□□□ 1.2
CDH11P55287 CR559946.2-201ENST00000623684 991 ntBASIC22.52■■□□□ 1.2
CDH11P55287 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDH11P55287 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.51■■□□□ 1.19
CDH11P55287 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDH11P55287 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.51■■□□□ 1.19
CDH11P55287 AC145676.1-201ENST00000514988 2004 ntBASIC22.51■■□□□ 1.19
CDH11P55287 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDH11P55287 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CDH11P55287 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDH11P55287 WHAMMP2-203ENST00000563942 1603 ntBASIC22.49■■□□□ 1.19
CDH11P55287 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.49■■□□□ 1.19
CDH11P55287 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CDH11P55287 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDH11P55287 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.49■■□□□ 1.19
CDH11P55287 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms