Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LINGO3P0C6S8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LINGO3P0C6S8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LINGO3P0C6S8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
LINGO3P0C6S8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
LINGO3P0C6S8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LINGO3P0C6S8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
LINGO3P0C6S8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.89■■□□□ 1.41
LINGO3P0C6S8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
LINGO3P0C6S8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LINGO3P0C6S8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
LINGO3P0C6S8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LINGO3P0C6S8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LINGO3P0C6S8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LINGO3P0C6S8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.87■■□□□ 1.41
LINGO3P0C6S8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LINGO3P0C6S8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LINGO3P0C6S8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LINGO3P0C6S8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
LINGO3P0C6S8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LINGO3P0C6S8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.87■■□□□ 1.41
LINGO3P0C6S8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.87■■□□□ 1.41
LINGO3P0C6S8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LINGO3P0C6S8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LINGO3P0C6S8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.86■■□□□ 1.41
LINGO3P0C6S8 RPS2P35-201ENST00000443417 897 ntBASIC23.85■■□□□ 1.41
LINGO3P0C6S8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
LINGO3P0C6S8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
LINGO3P0C6S8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
LINGO3P0C6S8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
LINGO3P0C6S8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
LINGO3P0C6S8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.84■■□□□ 1.41
LINGO3P0C6S8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LINGO3P0C6S8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
LINGO3P0C6S8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
LINGO3P0C6S8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
LINGO3P0C6S8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LINGO3P0C6S8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
LINGO3P0C6S8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.83■■□□□ 1.41
LINGO3P0C6S8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
LINGO3P0C6S8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
LINGO3P0C6S8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LINGO3P0C6S8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LINGO3P0C6S8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LINGO3P0C6S8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LINGO3P0C6S8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
LINGO3P0C6S8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
LINGO3P0C6S8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.82■■□□□ 1.4
LINGO3P0C6S8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.81■■□□□ 1.4
LINGO3P0C6S8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
LINGO3P0C6S8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.81■■□□□ 1.4
LINGO3P0C6S8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LINGO3P0C6S8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINGO3P0C6S8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINGO3P0C6S8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINGO3P0C6S8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LINGO3P0C6S8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.79■■□□□ 1.4
LINGO3P0C6S8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.79■■□□□ 1.4
LINGO3P0C6S8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
LINGO3P0C6S8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LINGO3P0C6S8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.78■■□□□ 1.4
LINGO3P0C6S8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LINGO3P0C6S8 AC108673.1-201ENST00000510422 1159 ntBASIC23.78■■□□□ 1.4
LINGO3P0C6S8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.78■■□□□ 1.4
LINGO3P0C6S8 AC044849.2-201ENST00000606596 710 ntBASIC23.78■■□□□ 1.4
LINGO3P0C6S8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.77■■□□□ 1.4
LINGO3P0C6S8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LINGO3P0C6S8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
LINGO3P0C6S8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LINGO3P0C6S8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LINGO3P0C6S8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LINGO3P0C6S8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LINGO3P0C6S8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.77■■□□□ 1.4
LINGO3P0C6S8 CLDN5-201ENST00000403084 2357 ntBASIC23.77■■□□□ 1.4
LINGO3P0C6S8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.76■■□□□ 1.39
LINGO3P0C6S8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LINGO3P0C6S8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LINGO3P0C6S8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LINGO3P0C6S8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
LINGO3P0C6S8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LINGO3P0C6S8 LINC00543-201ENST00000567234 1845 ntBASIC23.75■■□□□ 1.39
LINGO3P0C6S8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.75■■□□□ 1.39
LINGO3P0C6S8 MIR6090-201ENST00000622481 60 ntBASIC23.75■■□□□ 1.39
LINGO3P0C6S8 AC145676.1-201ENST00000514988 2004 ntBASIC23.75■■□□□ 1.39
LINGO3P0C6S8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LINGO3P0C6S8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
LINGO3P0C6S8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINGO3P0C6S8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINGO3P0C6S8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LINGO3P0C6S8 AC012676.1-201ENST00000574705 1949 ntBASIC23.73■■□□□ 1.39
LINGO3P0C6S8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LINGO3P0C6S8 AC127502.1-201ENST00000399971 1502 ntBASIC23.73■■□□□ 1.39
LINGO3P0C6S8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LINGO3P0C6S8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LINGO3P0C6S8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
LINGO3P0C6S8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
LINGO3P0C6S8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LINGO3P0C6S8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LINGO3P0C6S8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LINGO3P0C6S8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms