Protein–RNA interactions for Protein: P08949

NMB, Neuromedin-B, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMBP08949 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NMBP08949 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NMBP08949 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NMBP08949 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NMBP08949 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NMBP08949 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NMBP08949 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
NMBP08949 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NMBP08949 AC068473.5-201ENST00000616428 2072 ntBASIC20.41■□□□□ 0.86
NMBP08949 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NMBP08949 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NMBP08949 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NMBP08949 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.4■□□□□ 0.86
NMBP08949 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.39■□□□□ 0.86
NMBP08949 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NMBP08949 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NMBP08949 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NMBP08949 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NMBP08949 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.39■□□□□ 0.85
NMBP08949 AC092803.2-201ENST00000564287 1899 ntBASIC20.38■□□□□ 0.85
NMBP08949 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NMBP08949 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NMBP08949 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NMBP08949 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.37■□□□□ 0.85
NMBP08949 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NMBP08949 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NMBP08949 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NMBP08949 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NMBP08949 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NMBP08949 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NMBP08949 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NMBP08949 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.36■□□□□ 0.85
NMBP08949 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NMBP08949 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.35■□□□□ 0.85
NMBP08949 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NMBP08949 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NMBP08949 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NMBP08949 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NMBP08949 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NMBP08949 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NMBP08949 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NMBP08949 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NMBP08949 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NMBP08949 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.33■□□□□ 0.85
NMBP08949 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NMBP08949 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NMBP08949 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.33■□□□□ 0.85
NMBP08949 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NMBP08949 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NMBP08949 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.32■□□□□ 0.84
NMBP08949 AP004833.2-201ENST00000532228 1454 ntBASIC20.32■□□□□ 0.84
NMBP08949 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.32■□□□□ 0.84
NMBP08949 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
NMBP08949 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.32■□□□□ 0.84
NMBP08949 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.32■□□□□ 0.84
NMBP08949 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NMBP08949 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NMBP08949 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.31■□□□□ 0.84
NMBP08949 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NMBP08949 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
NMBP08949 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NMBP08949 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NMBP08949 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NMBP08949 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NMBP08949 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NMBP08949 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NMBP08949 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NMBP08949 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NMBP08949 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NMBP08949 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NMBP08949 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NMBP08949 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NMBP08949 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NMBP08949 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
NMBP08949 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NMBP08949 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
NMBP08949 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NMBP08949 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NMBP08949 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.27■□□□□ 0.84
NMBP08949 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NMBP08949 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NMBP08949 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NMBP08949 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NMBP08949 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
NMBP08949 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NMBP08949 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NMBP08949 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NMBP08949 DYNLL1-208ENST00000550178 581 ntBASIC20.26■□□□□ 0.83
NMBP08949 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NMBP08949 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NMBP08949 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NMBP08949 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NMBP08949 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NMBP08949 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NMBP08949 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NMBP08949 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NMBP08949 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
NMBP08949 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.24■□□□□ 0.83
NMBP08949 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NMBP08949 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms