Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.8■■■□□ 2.04
TPM3P06753 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.8■■■□□ 2.04
TPM3P06753 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
TPM3P06753 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
TPM3P06753 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
TPM3P06753 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TPM3P06753 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TPM3P06753 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
TPM3P06753 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
TPM3P06753 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TPM3P06753 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TPM3P06753 AC018358.1-201ENST00000631079 1402 ntBASIC27.76■■■□□ 2.04
TPM3P06753 CAHM-201ENST00000604200 896 ntBASIC27.76■■■□□ 2.03
TPM3P06753 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
TPM3P06753 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.76■■■□□ 2.03
TPM3P06753 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TPM3P06753 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.74■■■□□ 2.03
TPM3P06753 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.74■■■□□ 2.03
TPM3P06753 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TPM3P06753 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TPM3P06753 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TPM3P06753 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TPM3P06753 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
TPM3P06753 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.73■■■□□ 2.03
TPM3P06753 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.72■■■□□ 2.03
TPM3P06753 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
TPM3P06753 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TPM3P06753 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
TPM3P06753 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
TPM3P06753 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
TPM3P06753 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TPM3P06753 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
TPM3P06753 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.69■■■□□ 2.02
TPM3P06753 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TPM3P06753 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
TPM3P06753 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
TPM3P06753 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
TPM3P06753 AC092803.2-201ENST00000564287 1899 ntBASIC27.69■■■□□ 2.02
TPM3P06753 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TPM3P06753 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
TPM3P06753 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
TPM3P06753 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
TPM3P06753 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
TPM3P06753 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TPM3P06753 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.67■■■□□ 2.02
TPM3P06753 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.67■■■□□ 2.02
TPM3P06753 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
TPM3P06753 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
TPM3P06753 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC27.66■■■□□ 2.02
TPM3P06753 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TPM3P06753 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
TPM3P06753 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.66■■■□□ 2.02
TPM3P06753 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.66■■■□□ 2.02
TPM3P06753 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.65■■■□□ 2.02
TPM3P06753 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
TPM3P06753 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TPM3P06753 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.65■■■□□ 2.02
TPM3P06753 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
TPM3P06753 AC135983.2-203ENST00000454486 1613 ntBASIC27.64■■■□□ 2.02
TPM3P06753 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.64■■■□□ 2.02
TPM3P06753 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TPM3P06753 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TPM3P06753 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.01
TPM3P06753 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
TPM3P06753 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
TPM3P06753 AC136428.2-201ENST00000563187 214 ntBASIC27.63■■■□□ 2.01
TPM3P06753 AC097358.2-201ENST00000607541 1159 ntBASIC27.63■■■□□ 2.01
TPM3P06753 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TPM3P06753 MIR762-201ENST00000390236 83 ntBASIC27.62■■■□□ 2.01
TPM3P06753 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC27.62■■■□□ 2.01
TPM3P06753 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
TPM3P06753 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TPM3P06753 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.61■■■□□ 2.01
TPM3P06753 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
TPM3P06753 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
TPM3P06753 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TPM3P06753 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.6■■■□□ 2.01
TPM3P06753 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.6■■■□□ 2.01
TPM3P06753 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.6■■■□□ 2.01
TPM3P06753 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TPM3P06753 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TPM3P06753 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
TPM3P06753 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
TPM3P06753 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.58■■■□□ 2.01
TPM3P06753 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
TPM3P06753 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.58■■■□□ 2
TPM3P06753 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2
TPM3P06753 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.57■■■□□ 2
TPM3P06753 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.57■■■□□ 2
TPM3P06753 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
TPM3P06753 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.57■■■□□ 2
TPM3P06753 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.57■■■□□ 2
TPM3P06753 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
TPM3P06753 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.57■■■□□ 2
TPM3P06753 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.56■■■□□ 2
TPM3P06753 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TPM3P06753 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.56■■■□□ 2
TPM3P06753 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TPM3P06753 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.55■■■□□ 2
TPM3P06753 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.55■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms