Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV10-1A0A0K0K1A3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV10-1A0A0K0K1A3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV10-1A0A0K0K1A3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV10-1A0A0K0K1A3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV10-1A0A0K0K1A3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV10-1A0A0K0K1A3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV10-1A0A0K0K1A3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV10-1A0A0K0K1A3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV10-1A0A0K0K1A3 AC021231.2-201ENST00000594613 730 ntBASIC17.55■□□□□ 0.4
TRBV10-1A0A0K0K1A3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV10-1A0A0K0K1A3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV10-1A0A0K0K1A3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRBV10-1A0A0K0K1A3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV10-1A0A0K0K1A3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.54■□□□□ 0.4
TRBV10-1A0A0K0K1A3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV10-1A0A0K0K1A3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV10-1A0A0K0K1A3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV10-1A0A0K0K1A3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.52■□□□□ 0.4
TRBV10-1A0A0K0K1A3 AL449106.1-201ENST00000608517 1980 ntBASIC17.51■□□□□ 0.39
TRBV10-1A0A0K0K1A3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV10-1A0A0K0K1A3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.51■□□□□ 0.39
TRBV10-1A0A0K0K1A3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.51■□□□□ 0.39
TRBV10-1A0A0K0K1A3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV10-1A0A0K0K1A3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 AP004609.3-201ENST00000610705 1884 ntBASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 AC091060.1-201ENST00000623524 1766 ntBASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 WHAMMP3-201ENST00000611636 1609 ntBASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRBV10-1A0A0K0K1A3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV10-1A0A0K0K1A3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRBV10-1A0A0K0K1A3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV10-1A0A0K0K1A3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV10-1A0A0K0K1A3 AC145676.1-201ENST00000514988 2004 ntBASIC17.48■□□□□ 0.39
TRBV10-1A0A0K0K1A3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV10-1A0A0K0K1A3 AC142472.1-201ENST00000612013 1741 ntBASIC17.47■□□□□ 0.39
TRBV10-1A0A0K0K1A3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRBV10-1A0A0K0K1A3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRBV10-1A0A0K0K1A3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.47■□□□□ 0.39
TRBV10-1A0A0K0K1A3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV10-1A0A0K0K1A3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV10-1A0A0K0K1A3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV10-1A0A0K0K1A3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV10-1A0A0K0K1A3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV10-1A0A0K0K1A3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV10-1A0A0K0K1A3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBV10-1A0A0K0K1A3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV10-1A0A0K0K1A3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV10-1A0A0K0K1A3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV10-1A0A0K0K1A3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV10-1A0A0K0K1A3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV10-1A0A0K0K1A3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV10-1A0A0K0K1A3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV10-1A0A0K0K1A3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV10-1A0A0K0K1A3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV10-1A0A0K0K1A3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV10-1A0A0K0K1A3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRBV10-1A0A0K0K1A3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV10-1A0A0K0K1A3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV10-1A0A0K0K1A3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV10-1A0A0K0K1A3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRBV10-1A0A0K0K1A3 LINC01971-201ENST00000617888 1048 ntBASIC17.44■□□□□ 0.38
TRBV10-1A0A0K0K1A3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRBV10-1A0A0K0K1A3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV10-1A0A0K0K1A3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV10-1A0A0K0K1A3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV10-1A0A0K0K1A3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV10-1A0A0K0K1A3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV10-1A0A0K0K1A3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV10-1A0A0K0K1A3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV10-1A0A0K0K1A3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRBV10-1A0A0K0K1A3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRBV10-1A0A0K0K1A3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV10-1A0A0K0K1A3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV10-1A0A0K0K1A3 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV10-1A0A0K0K1A3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV10-1A0A0K0K1A3 AC092803.2-201ENST00000564287 1899 ntBASIC17.41■□□□□ 0.38
TRBV10-1A0A0K0K1A3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV10-1A0A0K0K1A3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TRBV10-1A0A0K0K1A3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRBV10-1A0A0K0K1A3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV10-1A0A0K0K1A3 AC008813.1-201ENST00000536597 885 ntBASIC17.4■□□□□ 0.38
TRBV10-1A0A0K0K1A3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV10-1A0A0K0K1A3 DUSP8P4-201ENST00000399538 1761 ntBASIC17.4■□□□□ 0.38
TRBV10-1A0A0K0K1A3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRBV10-1A0A0K0K1A3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV10-1A0A0K0K1A3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV10-1A0A0K0K1A3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.39■□□□□ 0.37
TRBV10-1A0A0K0K1A3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.39■□□□□ 0.37
TRBV10-1A0A0K0K1A3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV10-1A0A0K0K1A3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms