Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-4A0A0B4J246 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAV8-4A0A0B4J246 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV8-4A0A0B4J246 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV8-4A0A0B4J246 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV8-4A0A0B4J246 AC135983.2-203ENST00000454486 1613 ntBASIC17.2■□□□□ 0.34
TRAV8-4A0A0B4J246 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV8-4A0A0B4J246 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-4A0A0B4J246 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV8-4A0A0B4J246 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV8-4A0A0B4J246 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-4A0A0B4J246 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRAV8-4A0A0B4J246 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-4A0A0B4J246 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-4A0A0B4J246 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-4A0A0B4J246 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-4A0A0B4J246 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRAV8-4A0A0B4J246 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-4A0A0B4J246 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-4A0A0B4J246 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV8-4A0A0B4J246 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-4A0A0B4J246 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV8-4A0A0B4J246 AC100797.4-201ENST00000631653 1827 ntBASIC17.18■□□□□ 0.34
TRAV8-4A0A0B4J246 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-4A0A0B4J246 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV8-4A0A0B4J246 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV8-4A0A0B4J246 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV8-4A0A0B4J246 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV8-4A0A0B4J246 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV8-4A0A0B4J246 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-4A0A0B4J246 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-4A0A0B4J246 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV8-4A0A0B4J246 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-4A0A0B4J246 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-4A0A0B4J246 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.16■□□□□ 0.34
TRAV8-4A0A0B4J246 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-4A0A0B4J246 AP002414.2-202ENST00000590929 1450 ntBASIC17.16■□□□□ 0.34
TRAV8-4A0A0B4J246 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV8-4A0A0B4J246 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-4A0A0B4J246 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-4A0A0B4J246 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-4A0A0B4J246 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-4A0A0B4J246 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV8-4A0A0B4J246 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-4A0A0B4J246 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.14■□□□□ 0.34
TRAV8-4A0A0B4J246 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-4A0A0B4J246 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-4A0A0B4J246 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRAV8-4A0A0B4J246 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-4A0A0B4J246 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-4A0A0B4J246 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.14■□□□□ 0.33
TRAV8-4A0A0B4J246 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV8-4A0A0B4J246 BX255925.1-201ENST00000566954 1854 ntBASIC17.14■□□□□ 0.33
TRAV8-4A0A0B4J246 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-4A0A0B4J246 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-4A0A0B4J246 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-4A0A0B4J246 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-4A0A0B4J246 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV8-4A0A0B4J246 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-4A0A0B4J246 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV8-4A0A0B4J246 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-4A0A0B4J246 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV8-4A0A0B4J246 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-4A0A0B4J246 WHAMMP2-203ENST00000563942 1603 ntBASIC17.12■□□□□ 0.33
TRAV8-4A0A0B4J246 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-4A0A0B4J246 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-4A0A0B4J246 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRAV8-4A0A0B4J246 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-4A0A0B4J246 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAV8-4A0A0B4J246 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-4A0A0B4J246 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-4A0A0B4J246 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-4A0A0B4J246 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAV8-4A0A0B4J246 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV8-4A0A0B4J246 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV8-4A0A0B4J246 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV8-4A0A0B4J246 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-4A0A0B4J246 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-4A0A0B4J246 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-4A0A0B4J246 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-4A0A0B4J246 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV8-4A0A0B4J246 DUX4L29-201ENST00000425409 679 ntBASIC17.09■□□□□ 0.33
TRAV8-4A0A0B4J246 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-4A0A0B4J246 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV8-4A0A0B4J246 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-4A0A0B4J246 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-4A0A0B4J246 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV8-4A0A0B4J246 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRAV8-4A0A0B4J246 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV8-4A0A0B4J246 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
TRAV8-4A0A0B4J246 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV8-4A0A0B4J246 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAV8-4A0A0B4J246 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAV8-4A0A0B4J246 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-4A0A0B4J246 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-4A0A0B4J246 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV8-4A0A0B4J246 LINC01003-201ENST00000564834 1764 ntBASIC17.07■□□□□ 0.32
TRAV8-4A0A0B4J246 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAV8-4A0A0B4J246 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-4A0A0B4J246 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms