Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 MKNK2-206ENST00000587416 4093 ntTSL 210.71□□□□□ -0.694e-9■□□□□ 10.9
SUB1P53999 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.844e-9■□□□□ 10.9
SUB1P53999 MKNK2-208ENST00000589441 803 ntTSL 59.41□□□□□ -0.94e-9■□□□□ 10.9
SUB1P53999 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)9.4□□□□□ -0.94e-9■□□□□ 10.9
SUB1P53999 MAN2A2-212ENST00000559341 623 ntTSL 29.22□□□□□ -0.934e-9■□□□□ 10.9
SUB1P53999 MAN2A2-226ENST00000560926 569 ntTSL 47.28□□□□□ -1.244e-9■□□□□ 10.9
SUB1P53999 MAN2A2-225ENST00000560880 718 ntTSL 26.14□□□□□ -1.434e-9■□□□□ 10.9
SUB1P53999 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC6.12□□□□□ -1.434e-9■□□□□ 10.9
SUB1P53999 AC087380.1-201ENST00000420465 1001 ntTSL 35.78□□□□□ -1.484e-9■□□□□ 10.9
SUB1P53999 MAN2A2-208ENST00000558538 576 ntTSL 45.07□□□□□ -1.64e-9■□□□□ 10.9
SUB1P53999 AC087380.1-203ENST00000420726 752 ntTSL 54.84□□□□□ -1.634e-9■□□□□ 10.9
SUB1P53999 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.61□□□□□ -1.674e-9■□□□□ 10.9
SUB1P53999 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.6□□□□□ -0.233e-6■□□□□ 10.9
SUB1P53999 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.313e-6■□□□□ 10.9
SUB1P53999 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.685e-14■□□□□ 10.9
SUB1P53999 COTL1-205ENST00000567278 5330 ntTSL 210.44□□□□□ -0.743e-6■□□□□ 10.9
SUB1P53999 NUSAP1-201ENST00000260359 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.135e-14■□□□□ 10.9
SUB1P53999 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.295e-14■□□□□ 10.9
SUB1P53999 NUSAP1-205ENST00000558123 1934 ntTSL 56.9□□□□□ -1.35e-14■□□□□ 10.9
SUB1P53999 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.435e-14■□□□□ 10.9
SUB1P53999 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.515e-14■□□□□ 10.9
SUB1P53999 ARF1-208ENST00000478336 930 ntTSL 218.23■□□□□ 0.514e-30■□□□□ 10.9
SUB1P53999 HSP90AA1-208ENST00000557234 584 ntTSL 312.94□□□□□ -0.344e-30■□□□□ 10.9
SUB1P53999 ARF1-203ENST00000470558 820 ntTSL 211.96□□□□□ -0.494e-30■□□□□ 10.9
SUB1P53999 HSP90AA1-206ENST00000556554 552 ntTSL 25.14□□□□□ -1.594e-30■□□□□ 10.9
SUB1P53999 HSP90AA1-203ENST00000553585 581 ntTSL 33.88□□□□□ -1.794e-30■□□□□ 10.9
SUB1P53999 UQCRC2-204ENST00000563711 2008 ntTSL 26.42□□□□□ -1.381e-9■□□□□ 10.9
SUB1P53999 EEF1A1-206ENST00000488500 792 ntTSL 25.9□□□□□ -1.461e-29■□□□□ 10.9
SUB1P53999 EEF1A1-209ENST00000495333 958 ntTSL 54.71□□□□□ -1.661e-29■□□□□ 10.9
SUB1P53999 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.185e-9■□□□□ 10.9
SUB1P53999 CRKL-202ENST00000411769 2037 ntTSL 1 (best)15.06■□□□□ 05e-9■□□□□ 10.9
SUB1P53999 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.84□□□□□ -0.195e-9■□□□□ 10.9
SUB1P53999 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.01□□□□□ -0.495e-9■□□□□ 10.9
SUB1P53999 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.99□□□□□ -0.495e-9■□□□□ 10.9
SUB1P53999 EIF4G1-221ENST00000441154 4311 ntTSL 5 BASIC8.81□□□□□ -15e-9■□□□□ 10.9
SUB1P53999 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.53e-12■□□□□ 10.8
SUB1P53999 TXNIP-203ENST00000488537 1509 ntTSL 55.54□□□□□ -1.523e-12■□□□□ 10.8
SUB1P53999 TXNIP-202ENST00000486597 509 ntTSL 23.86□□□□□ -1.793e-12■□□□□ 10.8
SUB1P53999 QARS-225ENST00000634336 486 ntTSL 58.55□□□□□ -1.043e-8■□□□□ 10.8
SUB1P53999 QARS-229ENST00000634473 643 ntTSL 58.02□□□□□ -1.133e-8■□□□□ 10.8
SUB1P53999 QARS-224ENST00000497635 386 ntTSL 37.96□□□□□ -1.143e-8■□□□□ 10.8
SUB1P53999 QARS-223ENST00000494984 679 ntTSL 27.22□□□□□ -1.253e-8■□□□□ 10.8
SUB1P53999 QARS-220ENST00000487495 451 ntTSL 36.19□□□□□ -1.423e-8■□□□□ 10.8
SUB1P53999 QARS-210ENST00000466179 334 ntTSL 34.04□□□□□ -1.763e-8■□□□□ 10.8
SUB1P53999 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.46□□□□□ -0.578e-7■□□□□ 10.8
SUB1P53999 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.918e-7■□□□□ 10.8
SUB1P53999 PRC1-206ENST00000555455 830 ntTSL 39□□□□□ -0.978e-7■□□□□ 10.8
SUB1P53999 PRC1-202ENST00000394249 3034 ntTSL 1 (best) BASIC8.56□□□□□ -1.048e-7■□□□□ 10.8
SUB1P53999 PRC1-217ENST00000560423 755 ntTSL 34.97□□□□□ -1.618e-7■□□□□ 10.8
SUB1P53999 PRC1-210ENST00000556972 728 ntTSL 54.81□□□□□ -1.648e-7■□□□□ 10.8
SUB1P53999 TLN1-207ENST00000489255 798 ntTSL 210.02□□□□□ -0.816e-7■□□□□ 10.8
SUB1P53999 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.484e-8■□□□□ 10.8
SUB1P53999 CIRBP-208ENST00000586548 1734 ntTSL 317.87■□□□□ 0.454e-8■□□□□ 10.8
SUB1P53999 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.28■□□□□ 0.24e-8■□□□□ 10.8
SUB1P53999 CIRBP-205ENST00000585913 833 ntTSL 316.19■□□□□ 0.184e-8■□□□□ 10.8
SUB1P53999 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.134e-8■□□□□ 10.8
SUB1P53999 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.14e-8■□□□□ 10.8
SUB1P53999 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -04e-8■□□□□ 10.8
SUB1P53999 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.75□□□□□ -0.054e-8■□□□□ 10.8
SUB1P53999 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.124e-8■□□□□ 10.8
SUB1P53999 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.124e-8■□□□□ 10.8
SUB1P53999 CIRBP-203ENST00000444172 584 ntTSL 313.88□□□□□ -0.194e-8■□□□□ 10.8
SUB1P53999 CIRBP-237ENST00000592234 571 ntTSL 513.51□□□□□ -0.254e-8■□□□□ 10.8
SUB1P53999 CIRBP-212ENST00000587169 3028 ntTSL 213.49□□□□□ -0.254e-8■□□□□ 10.8
SUB1P53999 CIRBP-232ENST00000591376 830 ntTSL 313.49□□□□□ -0.254e-8■□□□□ 10.8
SUB1P53999 CIRBP-210ENST00000586636 938 ntTSL 213.49□□□□□ -0.254e-8■□□□□ 10.8
SUB1P53999 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.264e-8■□□□□ 10.8
SUB1P53999 CIRBP-206ENST00000585914 1052 ntTSL 513.04□□□□□ -0.324e-8■□□□□ 10.8
SUB1P53999 CIRBP-228ENST00000590347 3117 ntTSL 211.86□□□□□ -0.514e-8■□□□□ 10.8
SUB1P53999 CIRBP-242ENST00000593093 3528 ntTSL 211.51□□□□□ -0.574e-8■□□□□ 10.8
SUB1P53999 CIRBP-218ENST00000588344 370 ntTSL 37.09□□□□□ -1.274e-8■□□□□ 10.8
SUB1P53999 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.72e-15■□□□□ 10.8
SUB1P53999 RPS10-203ENST00000464218 615 ntTSL 59.61□□□□□ -0.872e-15■□□□□ 10.8
SUB1P53999 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.952e-15■□□□□ 10.8
SUB1P53999 RPS10-206ENST00000494077 781 ntTSL 28.99□□□□□ -0.972e-15■□□□□ 10.8
SUB1P53999 RPS10-205ENST00000480942 734 ntTSL 28.92□□□□□ -0.982e-15■□□□□ 10.8
SUB1P53999 RPS10-204ENST00000467531 777 ntTSL 28.87□□□□□ -0.992e-15■□□□□ 10.8
SUB1P53999 RPS10-201ENST00000326199 644 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.142e-15■□□□□ 10.8
SUB1P53999 RPS10-NUDT3-203ENST00000639877 2911 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.142e-15■□□□□ 10.8
SUB1P53999 RPS10-202ENST00000344700 650 ntTSL 3 BASIC7.34□□□□□ -1.232e-15■□□□□ 10.8
SUB1P53999 RPS10-NUDT3-201ENST00000605528 595 ntTSL 55.24□□□□□ -1.572e-15■□□□□ 10.8
SUB1P53999 PPP2R1A-202ENST00000391791 979 ntTSL 213.75□□□□□ -0.214e-7■□□□□ 10.8
SUB1P53999 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.44e-7■□□□□ 10.8
SUB1P53999 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC9.34□□□□□ -0.914e-7■□□□□ 10.8
SUB1P53999 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.262e-7■□□□□ 10.7
SUB1P53999 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.52e-7■□□□□ 10.7
SUB1P53999 RPS14-206ENST00000519855 398 ntTSL 29.96□□□□□ -0.823e-32■□□□□ 10.7
SUB1P53999 GLUL-207ENST00000463851 939 ntTSL 37.82□□□□□ -1.167e-7■□□□□ 10.7
SUB1P53999 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.324e-7■□□□□ 10.7
SUB1P53999 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.994e-7■□□□□ 10.7
SUB1P53999 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -24e-7■□□□□ 10.7
SUB1P53999 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.89□□□□□ -0.513e-8■□□□□ 10.7
SUB1P53999 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC5.85□□□□□ -1.473e-8■□□□□ 10.7
SUB1P53999 ARL6IP1-205ENST00000563861 948 ntTSL 1 (best)4.86□□□□□ -1.633e-8■□□□□ 10.7
SUB1P53999 AC005726.2-201ENST00000481916 2091 ntTSL 1 (best)17.17■□□□□ 0.342e-6■□□□□ 10.7
SUB1P53999 TCF3-210ENST00000587235 986 ntTSL 518.95■□□□□ 0.626e-7■□□□□ 10.7
SUB1P53999 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.65■□□□□ 0.426e-7■□□□□ 10.7
SUB1P53999 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.166e-7■□□□□ 10.7
SUB1P53999 TCF3-213ENST00000590436 1149 ntTSL 515.59■□□□□ 0.096e-7■□□□□ 10.7
SUB1P53999 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.37■□□□□ 0.056e-7■□□□□ 10.7
Retrieved 100 of 11,644 protein–RNA pairs in 278.3 ms